Comments (4)
Mark could write tests (that generate warnings, not failures) over the mapping files, but that will only check if nmdc-schema paths still exist, not if the mappings are proper.
Could just add a README to the mappings directory
from nmdc-schema.
depth
mapping is interesting too
depth
source would ideally be lakeSampleDepth1
etc. but there is a lots of inter-field dependency here
TLDR flat file doesn't really capture the mapping!
from nmdc-schema.
see also
from nmdc-schema.
long term: could use linkml-transformer
from nmdc-schema.
Related Issues (20)
- `berkeley-schema-fy24`: Implement migrator that removes slots from `nmdc:MassSpectrometry` documents
- review id_locus pattern HOT 6
- Migrations: Restore adapter method that was discarded during merge HOT 2
- define "soft schema freeze" along with exceptions framework HOT 6
- restore schema module independence tests HOT 1
- establish technical and social barriers to clever schema workarounds HOT 1
- nmdc-schema needs a more global mechanism for capturing ownership-like credit HOT 5
- remove unused Python code HOT 2
- `berkeley-schema-fy24`: Update migrators to use optimized adapter methods
- Make `ExtractionTarget` mutlivalued to accommodate MPLEX extractions HOT 1
- `berkeley-schema-fy24`: Implement migrator that merges some collections HOT 5
- Map 1:1 Database slots to PlannedProcess subclasses with depth of 1 HOT 1
- generate reports of all observed MIxS environmental triad slot values, within a given context HOT 1
- `Extraction` class lacks a constraint that indicates its expected usage
- reassess temporal modeling esp. for WorkflowChain HOT 1
- standardize quotation marks in schema and example data files HOT 2
- `berkeley-schema-fy24`: Make migrator that removes `MetagenomeAnnotation.gold_analysis_project_identifiers` field HOT 2
- backmerge issue with ID mention pattern constraints on WorkflowExecution HOT 3
- `berkeley-schema-fy24`: Implement migrator that adds `replaces` field to `WorkflowChain` documents HOT 1
- `berkeley-schema-fy24`: Delete obsolete code, including code obsoleted by Berkeley schema changes
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from nmdc-schema.