Related Issues (20)
- Expand `FileTypeEnum` to include "LC-MS Lipidomics Results" with a description of "LC-MS-based lipid assignment results table"
- Master `Information` class issue HOT 13
- Merge `nmdc-schema/main` branch (base) into `berkeley-schema-fy24/main` branch (fork)
- `Database` class has two slots named `functional_annotation_agg`
- `Database` class has two slots named `planned_process_set` HOT 1
- Class Extraction issues HOT 1
- Expand permissible values on `FileTypeEnum` for Metaproteomics related files HOT 1
- Omit derived files from repo (generate them locally instead)
- `berkeley-schema-fy24`: Description of `type` slot may be inaccurate (`id` versus `class_uri`)
- berkeley-schema-fy24: what are the global expectations for usign the `git_url` slot?
- issues with was_generated_by HOT 1
- `berkeley-schema-fy24`: Migrator `migrator_from_X_to_PR10.py` fails to load YAML file when used via PyPI package
- `src/data/valid/Database-biosample-exhasutive.yaml` requires MIxS `multivalued` slots with class ranges to be `inlined_as_list` HOT 2
- `eluent_introduction_category` modeling broken in latest backmerge HOT 5
- nmdc-schema should not use `string_serialization`
- 2024 nmdc-schema paper? HOT 1
- remove `domain` assertions from slot definitions HOT 1
- minimize use of `any_of` r`ange`s, `rules` and `slot_usages`
- `berkeley-schema-fy24`: Finalize names of Berkeley schema migrators HOT 3
- update to enforce including id_version in WorkflowExecutionActivity subclasses HOT 3
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