mmyeung / janis-unix

Unix tools and data types for Janis

Janis - Unix

This repository contains common unix tools and data types for Janis.

Refer to the documentation.

Data types

The data types are a way of encapsulating information about a particular input or output. Some common unix data types are CSV, TSV or TarFile. Visit the documentation for a full list.

Documentation

Documentation is generated on Janis. To generate new documentation you will need to:

1. Commit your changes here,
2. Update the submodule pointer on Janis,
3. Checkout Janis (recursively),
4. Run the regenerate script janis/docs/regeneratedocumentation.py,
5. Commit these changes and the documentation will autobuild on ReadTheDocs.