ncbi-nlp / deepseenet Goto Github PK
View Code? Open in Web Editor NEW:eyes: DeepSeeNet is a deep learning framework for classifying patient-based age-related macular degeneration severity in retinal color fundus photographs.
License: Other
:eyes: DeepSeeNet is a deep learning framework for classifying patient-based age-related macular degeneration severity in retinal color fundus photographs.
License: Other
Hi, I don't know where the best model, can you help me ?
Hello i am trying to run the project but i am not able to import deepseenet. any leads will be appreciated
There are 34 loci for age-related macular degeneration, but I just find only one (rs2230199) in the AREDS dataset.
I find the loci information from two files:
PhenoGenotypeFiles/RootStudyConsentSet_phs000001.AREDS.v3.p1.c1.EDO/GenotypeFiles/phg000001.AREDS.original-format.Illumina100K.v1.p1.c1.EDO.tar
PhenoGenotypeFiles/RootStudyConsentSet_phs000001.AREDS.v3.p1.c1.EDO/GenotypeFiles/phg000002.AREDS.original-format.Affy100K.v1.p1.c1.EDO.tar
Could you please share the genetic variants preprocessing code?
It would also be very helpful if you could tell me which file I should use to find the correct genotype information?
Thanks very much!
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