ncbi-nlp / eztag Goto Github PK

How to install the ezTag in my computer?

When trying to Auto Annotate with Lexicon, the annotation task remains in 'Requested' status and does not finish.

Your bundle is locked to mimemagic (0.3.4) from rubygems repository https://rubygems.org/ or installed locally, but that version can no longer be found in that source. That means the author of mimemagic (0.3.4) has removed it. You'll need to update your bundle to a version other than mimemagic (0.3.4) that hasn't been removed in order to install.
rails/rails#41750

current versions of ruby and rails in the package are no longer supported, is it possible to update the app to the supported versions of ruby /rails?
Thanks!

Dear,

In an attempt to run rake db:migrate I faced the following errors:

FILE: 20161226030601_add_lexicon_group_id_to_task.rb

class AddLexiconGroupIdToTask < ActiveRecord::Migration[5.0]
  def change
    **remove_reference :tasks, :lexicon, index: true, foreign_key: true**
    add_reference :tasks, :lexicon_group, index: true, foreign_key: true
  end
end

And
FILE: 20161224055432_create_lexicon_groups.rb

class CreateLexiconGroups < ActiveRecord::Migration[5.0]
  def change
    **remove_reference :lexicons, :collection, index: true, foreign_key: true**
    
    **remove_column :collections, :mode_url**

    add_reference :tasks, :lexicon, index: true, foreign_key: true

    remove_column :tasks, :model_url
    remove_column :tasks, :xml_url

    create_table :lexicon_groups do |t|
      t.string :name
      t.references :user, foreign_key: true

      t.timestamps
    end
    add_reference :lexicons, :lexicon_group, index: true, foreign_key: true    
  end
end

The marked lines raise errors as the relations don't exist. I've removed the lines and everything goes well.

Can you confirm that by removing them the problem goes away or is another solution expected?

Thanks.