ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
<img src="docs/ggtree.png" height="128", align="right" />
The ggtree
package extending the ggplot2
package. It based on grammar of graphics and takes all the good parts of ggplot2
. ggtree
is designed for not only viewing phylogenetic tree but also displaying annotation data on the tree.
Please cite the following article when using ggtree
:
G Yu, DK Smith, H Zhu, Y Guan, TTY Lam*. ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data. Methods in Ecology and Evolution. 2017, 8(1):28-36.
For details, please visit our project website, https://guangchuangyu.github.io/ggtree.
Citation
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