smsaladi / genome_size_vs_protein_count

Shiny app that plots NCBI genomes size versus protein count

Genome size vs. protein count

A Shiny app that plots an up-to-date version of the total number of annotated proteins in genomes submitted to GenBank as a function of genome size (based on data provided by NCBI genome reports). The app stays up-to-date by retrieving data from the NCBI FTP server upon loading.

Image on Wikipedia is a frozen version of one created by this app (using the Download SVG button).

URL: https://saladi.shinyapps.io/genome_size_vs_protein_count/

Notes

Commits to branches are automatically deployed to shiny via a Travis CI build.