soybase / gomap

Introduction

What is GOMAP?

Gene Ontology - Meta Annotator for Plants (GOMAP) is a pipeline that annotates GO terms to plant protein sequences. The pipeline uses three different approaches to annotate GO terms to plant proteins and uses a mix of custom code and existing software tools to assign GO terms. The pipeline was designed to create a high confidence GO annotation dataset for reference proteomes, and it is recommended that the pipeline in its current form used for that.

This version of GOMAP is only intended for development purposes. Please use GOMAP-singularity for annotating plant protein sequences

Please see ReadTheDocs for detailed documentation