tencentailabhealthcare / pysodb Goto Github PK

I want to download the PDAC data,and choose one of the samples'annotation

Hi,

Thank you for the great repository and db. I was wondering where to get the full-resolution tissue images for each spatial sample. Do you have access to them? Or do I need to go and check every study individually?

It would be nice to have those in the database as well :)

sincerely,
Rushin

conda create --name pysodb python=3.8 -y
conda activate pysodb

git clone https://github.com/TencentAILabHealthcare/pysodb.git

cd pysodb
python setup.py install

The last installation command reports an error:
error: urllib3 2.0.0a3 is installed but urllib3<1.27,>=1.21.1 is required by {'requests'}

After installing pip install urllib3==1.26.14 and pysod, other errors emerge when import pysodb

Would it be possible to add a data browser or search function to the repository like what you did in the database? Incorporating this feature would significantly enhance the utility of the repository for our data analysis tasks.

Thank you for considering this enhancement.