Topic: ctdna Goto Github
Some thing interesting about ctdna
Some thing interesting about ctdna
ctdna,R package to work with ctDNA sequencing data
User: alkodsi
Home Page: https://alkodsi.github.io/ctDNAtools/
ctdna,As a tool for cancer subtype prediction, Keraon uses features derived from cell-free DNA (cfDNA) in conjunction with PDX reference models to perform both classification and heterogenous phenotype fraction estimation.
User: denniepatton
ctdna,Structural Variants in cell-free tumor DNA
User: drvenki
ctdna,
Organization: green-lab-mdacc
ctdna,Supplementary files for Paracchini, Beltrame et al., Clin Cancer Res, 2020.
User: lbeltrame
ctdna,Diagnostic performance of HPV-DeepSeek, a hybrid capture whole genome sequencing liquid biopsy for HPV-associated cancers
User: michaelebryan
ctdna,Workflow for collapsing of standard binary alignment mapping file generated by MSK-ACCESS
Organization: msk-access
Home Page: https://msk-access.gitbook.io/bam-collapsing
ctdna,Workflow for making MSK-ACCESS standard binary alignment mapping file.
Organization: msk-access
Home Page: https://msk-access.gitbook.io/uncollapsed-bam-generation
ctdna,High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants
User: ndbrown6
ctdna,Pipeline to call SNV's with 4 tools (VarDict, LoFreq, Mutect2 & SiNVICT)
User: nickveltmaat
ctdna,A simplified pipeline for ctDNA sequencing data analysis
Organization: opengene
ctdna,Deduplication for cfDNA sequencing data
Organization: opengene
ctdna,Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding
Organization: reiterlab
ctdna,Cancer estimation based on nucleosomes: Analysis of proportion of circulating tumor DNA fragments compared to nucleosome references.
User: tobiasroikjer
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