Topic: genomic-prediction Goto Github
Some thing interesting about genomic-prediction
Some thing interesting about genomic-prediction
genomic-prediction,Code associated with 'Rapid polygenic adaptation in a wild population of ash trees under a novel fungal epidemic'
User: careymetheringham
genomic-prediction,scripts and examples
User: dpcscience
genomic-prediction,Some deep learning genomics projects
User: ianwhale
genomic-prediction,Trait BLUP, a Feature Selection Package for Genomic Prediction
User: ianwhale
genomic-prediction,List of papers related to Agricultural Statistics, Plant Breeding, and Quantitative Genetics
User: igorkf
genomic-prediction,Code for "Using machine learning to combine genetic and environmental data for maize grain yield predictions across multi-environment trials" (Fernandes et. al 2024)
User: igorkf
Home Page: https://doi.org/10.1007/s00122-024-04687-w
genomic-prediction,Quantitative and population genetics analyses of populations, pools, half-sib/full-sib families, and polyploids
User: jeffersonfparil
genomic-prediction,Solves kernel ridge regression within the the mixed model framework. All the estimated components and parameters, e.g. BLUP of dual variables and BLUP of random predictor effects for the linear kernel (also known as RR-BLUP), are available.
User: ljacquin
Home Page: https://www.frontiersin.org/journals/genetics/articles/10.3389/fgene.2016.00145/full
genomic-prediction,Gradient Boosting Regression (GBR, https://github.com/scikit-learn/scikit-learn) model for genomic predictions
User: maeslopezortiz
genomic-prediction,R front-end for TASSEL
Organization: maize-genetics
Home Page: https://rtassel.maizegenetics.net
genomic-prediction,Genomic prediction of amino acid traits in Arabidopsis seeds
User: mishaploid
genomic-prediction,BAMdelbee is a novel tool for discovering homozygous deletions in Whole-exome-sequencing (WES) and whole-genome-sequencing (WGS) data. WES or WGS samples generated by the same method produce BAM files with similar alignment coverage across the genome. BAMdelbee locates homozygous deletions by pinpointing regions covered in all samples but the ones in question. We hereby demonstrate how our application can spot homozygous deletions absent from VCF files for being too vast, yet undetectable by chromosomal microarrays (CMA) for being too small. The application is freely available on our website and can run on a common laptop. Therefore, we recommend integrating it into WES and WGS interpretation pipelines for recessive diseases.
User: noam-hadar
genomic-prediction,An R package for sample size determination for genomic selection
User: oumarkme
Home Page: https://www.oumark.me/SSDFGP/
genomic-prediction,Training set determination for genomic selection.
User: oumarkme
Home Page: http://www.oumark.net/TSDFGS/
genomic-prediction,Can deep learning improve genomic prediction of complex human traits? by Pau Bellot, Gustavo de los Campos, Miguel PΓ©rez-Enciso, Genetics
User: paubellot
Home Page: http://www.genetics.org/content/210/3/809
genomic-prediction,Impact of LD regional heterogeneity on genome prediction and heritability estimation in livestock
User: rendy0505
genomic-prediction,2024 BreedWheat Genomic Selection pipeline
User: vangiangtran
genomic-prediction,This project documents informatics and genomic prediction to support the National Root Crop Research Institute 2021 cassava genomic selection breeding program.
User: wolfemd
Home Page: https://wolfemd.github.io/NRCRI_2021GS/
genomic-prediction,TARI 2020 GS: (1) Conversion of DArTseqLD data and imputation of DArT report DCas20-5629 (with GS C1). (2) Cross-validation and genomic prediction
User: wolfemd
Home Page: https://wolfemd.github.io/TARI_2020GS/index.html
genomic-prediction,Role of genomics on regulating rice grain metabolic variability under warmer nights: A statistical and image-based deep learning approach
User: yebigithub
genomic-prediction,Evaluating metabolic and genomic data for predicting grain traits under high night temperature stress in rice
User: yebigithub
Home Page: https://doi.org/10.1093/g3journal/jkad052
genomic-prediction,:bicyclist: Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
User: yinlilin
genomic-prediction,This is a public repository for relevant code from the publication of the same name.
User: zjwinn
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