Topic: lipidomics Goto Github
Some thing interesting about lipidomics
Some thing interesting about lipidomics
lipidomics,Data Mining and Analysis of Lipidomics datasets in R
User: ahmohamed
Home Page: https://www.lipidr.org/
lipidomics,Repository for metabolomics and lipidomics data processing app.
User: anitamnd
Home Page: https://computproteomics.bmb.sdu.dk/Metabolomics/
lipidomics,Alzheimer's Disease Neuroimaging Initiative: Untargeted Lipidomics Analysis
User: barupal
lipidomics,R package for Analyzing Lipidomic Datasets
User: bioinfomics
lipidomics,This repository contains codes I wrote mostly in R to perform various kinds of analysis of multi-omics datasets.
User: chika-ugwuodo
lipidomics,Galaxy tools for Python package DIMSpy: data processing of Direct-Infusion Mass Spectrometry-based metabolomics and lipidomics data
Organization: computational-metabolomics
lipidomics,This is a lipidomics only version of iSODA from NDCN.
Organization: cpm-metabolomics-lipidomics
lipidomics,This repository contains the script used to study blood pro-resolving mediators as biomarkers to predict the response of DMARD treatment in rheumatoid arthritis patients
User: eagomezc
Home Page: https://eagomezc.github.io/
lipidomics,This project aims at defining a set of guidelines for reproducible mass spectrometry-based experiments.
Organization: eubic
Home Page: https://eubic.github.io/ReproducibleMSGuidelines
lipidomics,Maven GUI: Metabolomics Analysis and Visualization Engine
User: eugenemel
Home Page: https://github.com/eugenemel/maven/releases
lipidomics,Quantify lipids using a feature table and internal standards table
Organization: garrettlab-uf
lipidomics,
User: harel-lab
lipidomics,Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidomics, exposomics, and environmental studies.
Organization: idslme
lipidomics,A light weight and fast parser for reading mzML, mzXML and netCDF data files
Organization: idslme
lipidomics,United Formula Annotation (UFA) for LC-HRMS data
Organization: idslme
lipidomics,Exhaustive Formula Annotation from ions to formula
Organization: idslme
lipidomics,A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
Organization: idslme
lipidomics,Core scripts for FluoroMatch, LipidMatch, and PolyMatch
Organization: innovativeomics
Home Page: https://innovativeomics.com/software/
lipidomics,LORA: Lipid Over-Representation Analysis
Organization: iphys-bioinformatics
Home Page: https://lora.metabolomics.fgu.cas.cz
lipidomics,The Hitchhiker’s Guide to untargeted lipidomics analysis: Practical guidelines
Organization: khrameeva-lab
lipidomics, iLipidome is a novel lipidomic data analysis framework.
Organization: lewislabucsd
lipidomics,A collection of awesome lipidomics tools and resources
Organization: lifs-tools
lipidomics,Goslin is the Grammar on succinct lipid nomenclature.
Organization: lifs-tools
Home Page: https://lifs-tools.org/goslin
lipidomics,Web application and REST Api for parsers for the Grammars on succinct lipid nomenclature (Goslin).
Organization: lifs-tools
Home Page: https://apps.lifs-tools.org/goslin
lipidomics,Java implementation of the latest shorthand nomenclature.
Organization: lifs-tools
Home Page: https://lifs-tools.github.io/jgoslin/
lipidomics,Python implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).
Organization: lifs-tools
Home Page: https://github.com/lifs-tools/goslin
lipidomics,R implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).
Organization: lifs-tools
Home Page: https://lifs-tools.github.io/rgoslin/
lipidomics,The R-language bindings for mzTab-M
Organization: lifs-tools
Home Page: https://lifs-tools.github.io/rmzTab-m/
lipidomics,Nara Marella
User: nara3m
Home Page: https://n3m.pages.dev
lipidomics,Addressing n<<p biology problems with interpretable random forest results via partial dependence plots. - Construction of an ideal high-density lipoprotein
User: ptogias
lipidomics,pyQms, generalized, fast and accurate mass spectrometry data quantification
Organization: pyqms
lipidomics,pyLFDA is a tool which allows analysis of pairwise lipid force distribution along with other functions such as curvature and diffusion.
Organization: raylabiiitd
lipidomics,Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of metabolites) in R.
Organization: respiratory-immunology-lab
lipidomics,A shiny app for my lipidomics workflow.
User: ricoderks
lipidomics,Shiny app to have a look at the quality of -omics data.
User: ricoderks
lipidomics,Python module for lipidomics LC MS/MS data analysis
Organization: saezlab
Home Page: https://saezlab.github.io/lipyd
lipidomics,ADViSELipidomics is a novel Shiny app for the preprocessing, analysis, and visualization of lipidomics data.
User: shinyfabio
Home Page: https://shinyfabio.github.io/ADViSELipidomics_book/
lipidomics,iSLS10 data analysis workshop
Organization: slinghub
lipidomics,Scripts and notes used in the iSLS11 workshop on data analysis
Organization: slinghub
lipidomics,iSLS9 data analysis workshop
Organization: slinghub
lipidomics,Functions and a Shiny app to correct class-based separation LC-MRM-MS lipidomics data for isotopic interferences
Organization: slinghub
Home Page: https://doi.org/10.1021/acs.analchem.0c04565
lipidomics,R scipts used for manuscript Sieber-Ruckstuhl, Burla, et al. (2019) Changes in the Canine Plasma Lipidome after Short- and Long-Term Excess Glucocorticoid Exposure'
Organization: slinghub
Home Page: https://doi.org/10.1038/s41598-019-42190-1
lipidomics,A DMS Shotgun Lipidomics Workflow Application to Facilitate High-Throughput, Comprehensive Lipidomics
User: syjgino
lipidomics,Collection of scripts for improving lipid constraints in yeast-GEM
Organization: sysbiochalmers
lipidomics,Python & R scripts collection for AdipoAtlas project
Organization: sysmedos
Home Page: https://doi.org/10.1016/j.xcrm.2021.100407
lipidomics,LipidHunter is capable to perform bottom up identification of lipids from LC-MS/MS and shotgun lipidomics data by resembling a workflow of manual spectra annotation. LipidHunter generates interactive HTML output with its unique six-panel-image, which provides an easy way to review, store, and share the identification results.
Organization: sysmedos
lipidomics, LipidLynxX provides the possibility to convert, cross-match, and link various lipid annotations to the tools supporting lipid ontology, pathway, and network analysis aiming systems-wide integration and functional annotation of lipidome dynamics in health and disease.
Organization: sysmedos
Home Page: https://www.biorxiv.org/content/10.1101/2020.04.09.033894v2
lipidomics,Git repository for the R package "LOBSTAHS" (Lipid and Oxylipin Biomarker Screening Through Adduct Hierarchy Sequences)
Organization: vanmooylipidomics
lipidomics,metaX: a flexible and comprehensive software for processing omics data.
User: wenbostar
lipidomics,Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
User: xieguigang
Home Page: https://mzkit.org
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