Topic: protein-dynamics Goto Github
Some thing interesting about protein-dynamics
Some thing interesting about protein-dynamics
protein-dynamics,A package for protein conformational ensemble analyses based on a differential geometry representation of protein backbones.
User: amarinhosn
protein-dynamics,Calculate protein structural representations (dihedral angles, CA pairwise distances, and strain analysis) for downstream analysis (e.g., PCA, t-SNE, or UMAP).
User: ammsa23
Home Page: https://ammsa23.github.io/colav/
protein-dynamics,An interactive visual simulator for distance-based protein folding
Organization: bhattacharya-lab
protein-dynamics,PORCUPINEplot is a script developed to automate the generation of porcupine plots of PCA analysis.
User: brendaferrari
protein-dynamics,sbm-tools is a simple python package for creating, modifying, and maintaining input files for native Structure-Based Model simulations to be used with the popular simulation software GROMACS.
User: c-sinner
protein-dynamics,Derive ΔG for single residues from HDX-MS data
User: jhsmit
Home Page: http://pyhdx.readthedocs.io
protein-dynamics,Kern Lab website
Organization: kernlab-brandeis
Home Page: https://kernlab-brandeis.github.io
protein-dynamics,Topological data analytic approach for discovering biophysical signatures in protein dynamics
Organization: lcrawlab
Home Page: https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1010045
protein-dynamics,A julia library for mode coupling analysis of protein simulations
User: littleblackfish
Home Page: http://arxiv.org/abs/1509.05483
protein-dynamics,C++ package that provides tools for correcting structural predictions of proteins (eg. from X-Ray Crystallography or AlphaFold) using X-ray small-angle scattering (SAXS) in solution
User: mckeownish
protein-dynamics,Development of Python library for standardized generation and evaluation/characterization of protein structural ensembles.
User: mikoszczyc
protein-dynamics,Program to calculate the most probable path between two equilibrium states of a biomolecule
User: niranjchandrasekaran
Home Page: https://niranjchandrasekaran.github.io/PyPath/
protein-dynamics,Code for generating movies of the most relevant movement modes of proteins from their PDB files, using rigidity clustering analysis
User: rudoroemer
protein-dynamics,Predicting allosteric and active site residues in proteins with machine learning and protein sequence, structure and dynamics features
User: sambitmishra0628
Home Page: https://sambitmishra0628.github.io/AR-PRED_source/
protein-dynamics,Prediction of protein thermodynamic stability changes upon mutations through a Gaussian Network Model simulating protein unfolding behavior
User: sambitmishra0628
protein-dynamics,protein dynamics analysis
User: tongwade
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