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matrixscreenercellprofiler

Cellprofiler modules for interfacing with Leica Matrix Screener module of LASAF

meddit

microscope

Python classes for serving remote instrumentation devices over Pyro4.

microscpsf-py

Fast and Accurate 3D PSF Computation for Fluorescence Microscopy

miplib

A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.

mmand

Mathematical Morphology in Any Number of Dimensions

models

Model zoo for genomics

moire-sim-demo

Some brief blurbs about a structured illumination microscopy demo

mqtt-javascript-demo

Demo using Javascript/Websockets as MQTT Client

mtm-python-oop

A more object-oriented python implementation of multi-template matching (mtm), relying on scikit-image and shapely.

multilabelling

Microscope and DIspenser Control Software for Multilabelling

multilabelling_hdf5_view

Interactive viewer for multilabelling images in HDF5 format implemented in PyQT

multiprocessing_generator

Prefetch elements from a Python generator in the background, from a separate process

multitemplatematching-python

Object-recognition using multiple templates in python

my_hv_gallery

HV gifs for discussion on gitter

mydockerstuff

My first baby steps with docker ...

mytoy

A toy repo illustrating a minimal installable Python package

n2v

This is the implementation of Noise2Void training.

n5-utils

simple standalone BigDataViewer for multiple N5 (or HDF5) datasets

napari

napari: a fast, interactive, multi-dimensional image viewer for python

napari-feature-visualization

Visualizing feature measurements on label images in napari

napari-ome-zarr

A reader for zarr backed OME-NGFF images

napariplayground

my first baby steps with Napari

nbdev_babysteps

babysteps with nbdev

nd2

Yet another nd2 (Nikon NIS Elements) file reader for python

neubias-porto2019

Hands-on Python: Plotting and Data Analysis

neubias_analystschool2019

NEUBIAS Bioimage Analyst School 2019

ngff-writer

A writer and reader for NGFF OME-Zarr datasets

npe2

napari plugin engine v2

npx

Some useful extensions for NumPy