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License: GNU Affero General Public License v3.0
a toolbox for utilize organelle genomic data
License: GNU Affero General Public License v3.0
How can I skip the alignment step?
I would like to download my query, apply -unique longest, but NOT align.
I understand the skip_primer, but I also want to -skip_align. -no_divide forces -unique not to execute.
I want to compare alignment characteristics across programs like CLC and BarcodeFinder.
This is an incredible tool by the way!
-Beau
...Trung_conda/OGU-1.3/lib/python3.7/site-packages/OGU/cli.py
Error in
ok1, _ = utils.get_third_party()
Correct in library:
ok1, _ = utils.get_third_party_path()
When I run:
python -m OGU.evaluate -fasta CDS-COX1.fasta
The error was:
File "/home/ktest/pipeline_env/software/environment/Trung_conda/OGU-1.3/lib/python3.7/site-packages/OGU/evaluate.py", line 451, in output_sliding
plt.style.use('seaborn-v0_8-colorblind')
When I pip install seaborn and change line 451 to seaborn, it fixed !
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