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Yi Xianfu's Projects

sack icon sack

s(hortcut)-ack: a faster way to use ag, ack (or grep)!

sailfish icon sailfish

Rapid Mapping-based Isoform Quantification from RNA-Seq Reads

salmon icon salmon

๐ŸŸ ๐Ÿฃ ๐Ÿฑ Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments

sambamba icon sambamba

Tools for working with SAM/BAM/CRAM data

samblaster icon samblaster

samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.

sample icon sample

Performs memory-efficient reservoir sampling on very large input files delimited by newlines

sampleqc icon sampleqc

Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data

sanddance icon sanddance

Visually explore, understand, and present your data.

sasquatch icon sasquatch

Predicting the impact of regulatory SNPs from cell and tissue specific DNase-footprints

sbp icon sbp

Simple Bash Prompt (SBP) is a bash prompt, which strives to be simple. But it isn't. But it looks kind of nice. I think.

scanner-inurlbr icon scanner-inurlbr

Advanced search in search engines, enables analysis provided to exploit GET / POST capturing emails & urls, with an internal custom validation junction for each target / url found.

sccancer icon sccancer

A package for automated processing of single cell RNA-seq data in cancer

sccatch icon sccatch

Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

scholar icon scholar

Analyse citation data from Google Scholar

scifetch icon scifetch

webpage crawling tools for pubmed, google scholar and rss

sciguide icon sciguide

็Žฐไปฃ็ง‘็ ”ๆŒ‡ๅŒ—

scihub.py icon scihub.py

Python API and command-line tool for Sci-Hub

scihub2pdf icon scihub2pdf

Downloads pdfs via a DOI number, article title or a bibtex file, using the database of libgen(sci-hub) , arxiv

scillus icon scillus

R Package for Single-Cell Dataset Processing and Visualization

scnv icon scnv

Single-cell Genome-wide CNV profiling

scrabble icon scrabble

Single Cell RNA-Seq imputAtion constrained By BuLk RNAsEq data (SCRABBLE)

scrcpy icon scrcpy

Display and control your Android device

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