GithubHelp home page GithubHelp logo

zeyang-shen / maggie Goto Github PK

View Code? Open in Web Editor NEW
8.0 1.0 0.0 172.75 MB

Bioinformatic approach to identify functional transcription factor binding motifs

License: GNU General Public License v3.0

Python 75.51% HTML 24.49%
bioinformatics transcription-factors genetic-variants motif-analysis dna-sequences

maggie's People

Contributors

zeyang-shen avatar

Stargazers

 avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar

Watchers

 avatar

maggie's Issues

Error while creating environment

Hi,

when running

conda env create --file environment.yml

I go the following error:

Pip subprocess error:
ERROR: Could not find a version that satisfies the requirement glob3 (from logomaker)
ERROR: No matching distribution found for glob3

failed

CondaEnvException: Pip failed

Most of the libraries are installed but this one failed. Is this something I need to fix on my side or is an issue of the environment?

thanks!

Motif Database

Thank you for making this fantastic tool!

What motif database do you use? If I wanted to use my own database, what format do I need to put it in? Thanks!

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.