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mastering-python-data-analysis

Mastering-Python-Data-Analysis

mastering-software-development-in-r

Code for all five courses in the "Mastering Software Development in R" specialization

materials

Bonus materials, exercises, and example projects for our Python tutorials

mchmm

Markov Chains and Hidden Markov Models in Python

mckb

Monarch Cancer Knowledge Base

mediumarticles

Sample of Python codes from mathematical problems

memusg

A 'time'-like utility for Unix that measures peak memory usage

mergesvcallers

heuristics to merge structural variant calls in VCF format.

metameta

metasv

MetaSV: An accurate and integrative structural-variant caller for next generation sequencing

methylation-analysis

methylationanalysisworkflow

A cross-package Bioconductor workflow for analysing methylation array data

methyldackel

A (mostly) universal methylation extractor for BS-seq experiments.

methylkit

R package for DNA methylation analysis

methylseq

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

methylstar

A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.

microbiome_helper

An assortment of scripts to help process and automate various microbiome and metagenomic bioinformatic tools.

miracum-pipe

Whole exome sequencing pipeline including advanced variant annotation features and automated PDF reporting.

ml-examples

some machine learning examples

mlbox

Machine Learning Algorithms implementations

mlcourse

Machine learning course materials.

mlens

ML-Ensemble – high performance ensemble learning

mlr

mlr: Machine Learning in R

mlwr

Machine Learning with R

mlxtend

A library of extension and helper modules for Python's data analysis and machine learning libraries.

ml_code

A repository for recording the machine learning code

mobster

For more details about Mobster please see

mobster-decovolution

Model-based subclonal deconvolution from bulk sequencing.

moco-psychophysics

modular-programming-with-python

Modular-Programming-with-Python Code