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monod2

MONOD2 is a toolkit for methylation haplotype analysis of bisulfite sequencing data

msatcommander

locate microsatellite repeats, design locus-specific primers, and tag 'em

mseq-cnv

msiprofiler

Repo that aids in the detection of microsatellite instabilities (MSI) from sequencing data

msisensor-ct

Microsatellite instability (MSI) detection for cfDNA samples.

msisensor-pro

Microsatellite Instability (MSI) detection using high-throughput sequencing data.

msk-grail-techval

High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants

multiplicationgame

Interactive Maths Game built with JavaScript

muon

muon is a multimodal omics Python framework

mutationinfo

Tool to retrieve location information of genetic variants

nb_distribution

novoBreak: local assembly for breakpoint detection in cancer genomes

ncbi-cxx-toolkit-public

NCBI C++ Toolkit package sources

ncov

Nextstrain build for novel coronavirus (nCoV)

neanderthal_ase

Analysis code accompanying the manuscript "Impacts of Neandertal-introgressed sequences on the landscape of human gene expression".

neat-genreads

NEAT read simulation tools

net-intro

Introduction to Network Technology

networkx

Official NetworkX source code repository.

neusomatic

NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection

nextflow

A DSL for data-driven computational pipelines

nextflow-example

A simple DSL2 workflow: tutorial

nextflow-vim

Nextflow plugin for VIM

nextflow_pipelines

The set of NGS processing pipelines used at Babraham

nextflow_training

Code for Nextflow trau

nf-alignment

Nextflow based alignment pipeline

nf-hack17-tutorial

Nextflow basic tutorial for newbie users

nf_ngschool20

Nextflow training material for NGSchool summer 2020

nglesspy

NGLess as a Python embedded language (experimental)

ngs-bits

Short-read sequencing tools

ngsassembly

NGS assembly pipeline bash script

ngseasy

Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)