barahona-research-group / multiscalecentrality Goto Github PK

The current implementation uses the out-dated networkx command for connected_component_subgraphs. This needs updating for users, otherwise it won't work with current networkx package.

There is a Centrality library called Centiserve which included a larger variety of centrality measures. Would be fun to see the correlation and accuracy of multiscale-ness of Centrality, as it seemed that Closeness and Degree Centrality is too cross-correlated.

From CentiServe in https://rdrr.io/cran/centiserve/man/:

• averagedis | Find the average distance of a node
• barycenter | Find the barycenter centrality score
• bottleneck | Find the BottleNeck centrality score
• centroid | Find the centroid value of graph vertices
• closeness.currentflow | Find current-flow closeness centrality
• closeness.freeman | Find the closeness centrality in a strongly connected graph
• closeness.latora | Find the variant (Latora) closeness centrality in a...
• closeness.residual | Find the residual closeness centrality
• closeness.vitality | Find the closeness vitality centrality in a strongly...
• clusterrank | Find the ClusterRank ranks in a graph
• communibet | Find the communicability betweenness centrality
• communitycent | Find the community-based node centrality
• crossclique | Find the cross-clique connectivity (centrality)
• decay | Find the decay centrality of a given vertex
• diffusion.degree | Find the variant (Latora) closeness centrality in a...
• dmnc | Find the density of maximum neighborhood component (DMNC) in...
• entropy | Find the entropy centrality in a graph
• epc | Find the edge percolated component (EPC) in a graph
• geokpath | Find the geodesic k-path centrality
• hubbell | Find the Hubbell centrality or the Hubbell Index
• katzcent | Find the Katz centrality (Katz Status Index)
• laplacian | Find the laplacian centrality
• leaderrank | Find the LeaderRank in a directed graph
• leverage | Find the leverage centrality
• lincent | Find the lin centrality in a graph
• lobby | Find the lobby index (centrality)
• markovcent | Find the markov centrality score
• mnc | Find the maximum neighborhood component (MNC)
• pairwisedis | Find the pairwise disconnectivity index
• radiality | Find the radiality centrality in a graph
• salsa | Find the SALSA as 'hub' or 'authority' score
• semilocal | Find the semi local centrality (or local centrality)
• topocoefficient | Find the topological coefficient of a node in a undirected...

According to NetRankr

• residual closeness (Dangalchev,2006)
• generalized closeness (Agneessens et al.,2017)
• decay centrality (Jackson, 2010)
• integration centrality (Valente & Foreman, 1998)
• subgraph centrality
• communicability centrality
• odd/even subgraph centrality
• katz status

References

• https://rdrr.io/cran/centiserve/
• https://www.rdocumentation.org/packages/tidygraph/versions/1.2.0/topics/centrality with reference to https://rdrr.io/cran/netrankr/man/netrankr.html
• http://cran.nexr.com/web/packages/CINNA/vignettes/CINNA.html#various-types-of-centralities-computation

With callbacks from GiulioRossetti/cdlib#148 and igraph/igraph#1741