biocore / basespace-qiime Goto Github PK

When i try to make the preprocessing of my four samples (WSG metagenomes), the task is aborted. When i perform the preprocessing one by one or in groups of three, i get the results. The problem is that i need the four together to use the qiime visualization app. With three samples i get the error: "Error in make_emperor.py: Due to the variation explained, Emperor could not plot at least 3 axes, check the input files to ensure that the percent explained is greater than 0.01 in at least three axes."
Any suggestion about this?
Thanks

When a user runs "QIIME Downstream "and goes to the report summary page, the core_diversity_analyses.py table will be shown on screen, however the links presented there don't work due to a limitation of BaseSpace. For the time being, users are advised to download the results to their computers.

I follow your recommendation but it still doesn't work.

Users should have the ability to provide more than a single app result into QIIME Downstream, meaning that all OTU tables found should be merged into one, and that should be fed into core_diversity_analyses.py.

Even download all the results, the rarefaction curve cannot show in browser(any browser)