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reanalysis_zanne2014

this includes all scripts, analyses, and results of our re-analysis of Zanne et al. 2014 Nature 506: 89-92

recipes

Werner Family Recipes

replaceddig

Fostering independent graduate research

returnoftheminivan

Data for response to Donoghue and Edward's response to Beaulieu and O'Meara. We have more cupholders, and they come filled with data! [And cheerios]

rgithub

R bindings for the github API

rhub-linux-builders

Docker configuration for the R-hub Linux builders

rjs

R in JavaScript

rnsf

Unofficial package to interface with NSF API

rorcid

A programmatic interface the Orcid.org API

rotl

Interface to Open Tree of Life API

rredis

R client for Redis

santree

Package for making Sankey diagrams for phylogenies

scheduler

R package for arranging meeting schedules

scholarnetwork

Extract and Visualize Google Scholar Collaboration Networks

selac

Model by O'Meara, Chai, and Gilchrist for SELection on Amino acids and/or Codons

selac-testing

replicates to test selac performance

selac_implementation

Sample code for debugging implementations

selac_kl

Tests for AIC as KL estimator for selac

selac_performance

Holds files to test selac performance

sentimood

A minimal sentiment analyzer based on @thinkroth's "Sentimental" and written in CoffeeScript

sisters

Package for doing sister group and other diversity comparisons

sleq

A sleek package to deal with sequences in R. Joint O'Meara lab project.

slurm-docker-cluster

A Slurm Cluster using docker-compose

spatialcontrast

Independent contrasts... in space!

spec

speciesflashcards

Quick app to make flash cards for learning species

spiculecomplexity

stateoftreeoflife

Work from the Chicago (May, 2017) FuturePhy sponsored workshop on the state of the tree of life

stltogcode

Simple package to convert from an .stl file (a 3d model) to GCODE to control a 2.5D CNC

summarizetaskview

Way to quickly summarize info from a task view (or other list of packages)