Name: Jon Haitz Legarreta Gorroño
Type: User
Company: Brigham and Women's Hospital, Mass General Brigham/Harvard Medical School
Bio: Postdoctoral research fellow interested in diffusion MRI, tractography, deep learning, computational neuroanatomy and reproducible scientific research
Location: Boston, MA, USA
Blog: https://jhlegarreta.github.io/
Jon Haitz Legarreta Gorroño's Projects
A wrapper around Jonathan Shewchuk's Robust Predicate code. http://www.cs.cmu.edu/~quake/robust.html
An ITK Module with a collection of additional filters for SimpleITK
Perform automatic skull-stripping for neuroimage analysis
External module for ITK v4 implementing the Young & Van Vliet recursive gaussian smoothing filter.
Sources for the ITKSoftwareGuide.
Cookbook examples for the Insight Toolkit documented with Sphinx
ITKv4 Module. This filter generates component images from an itk::Image of itk::Vector, itk::CovariantVector, or itk::SymmetricSecondRankTensor.
An ITK module to compute 3D thickness
Thin Shell Demons Mesh Registration
External Module for Total Variation Algorithms, providing wrap for https://github.com/albarji/proxTV
ITK-Based Implementation of Two-Projection 2D/3D Registration Method with an Application in Patient Setup for External Beam Radiotherapy
Scraped, buildable version of the wiki examples
Deep Learning for humans
Kitware Style Checker
Code for automatic segmentation of tract/bundles from tractography data based on the linear assignment problem (LAP).
http://public.kitware.com/LesionSizingKit/index.php/Main_Page
Example lesson using The Carpentries lesson template.
A weekly workshop series at ITP to teach machine learning with a focus on deep learning
A LaTeX2e package for typesetting Matlab code as it appears in the Matlab editor.
matplotlib: plotting with Python
MATLAB code for Multidimensional Diffusion MRI
Microstructure Diffusion Toolbox