Topic: crispr Goto Github
Some thing interesting about crispr
Some thing interesting about crispr
crispr,DNAdrive is a science project which makes data storage in bacteria possible. Given binary data, it constructs DNA sequences (aka packets) which can be used as protospacers in CRISPR-based systems, such as the one found in Escherichia Coli. 🔬
User: alexbrt
crispr,Flexible analysis of high-content CRISPR screening
Organization: arcinstitute
Home Page: https://screenpro2.rtfd.io
crispr,A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data
Organization: bimsbbioinfo
crispr,CRISPR, faster, better – The Crackling method for whole-genome target detection
Organization: bmds-lab
crispr,Search guide-RNA sequences given a genome or gene sequence
User: bretonics
crispr,Predicting Cell Health with Morphological Profiles
Organization: broadinstitute
crispr,Finding, Optimizing, and Reporting Cas Targets: a fully-integrated and open-source pipeline to design CRISPR mutagenesis experiments.
Organization: ccmbioinfo
Home Page: https://ccmbioinfo.github.io/FORCAST
crispr,Base functions and classes for CRISPR gRNA design
Organization: crisprverse
crispr,Comprehensive design of CRISPR gRNAs for nucleases and base editors
Organization: crisprverse
crispr,Useful human and mouse data for the crisprVerse ecosystem
Organization: crisprverse
crispr,On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
Organization: crisprverse
crispr,Collection of R packages that work in harmony for CRISPR gRNA design
Organization: crisprverse
crispr,Visualization of CRISPR guide RNAs (gRNAs)
Organization: crisprverse
crispr,Tutorials for the crisprVerse
Organization: crisprverse
crispr,The CRISPR assembler
User: ctskennerton
Home Page: http://ctskennerton.github.io/crass
crispr,Mining CRISPRs in Environmental Datasets
User: ctskennerton
crispr,Web app for CRISPR experiment setup and analysis
Organization: czbiohub-sf
crispr,List of software/websites/databases/other stuff for genome engineering
User: davidliwei
crispr,Python module to analyse CRISPR-based libraries
User: emanuelgoncalves
crispr,Integration of pharmacological and drop-out CRISPR-Cas9 screens
User: emanuelgoncalves
crispr,Data analysis scripts for Datlinger et. al, 2017 (doi:10.1038/nmeth.4177)
Organization: epigen
Home Page: https://crop-seq.computational-epigenetics.org
crispr,:earth_americas: Complex Topics Explained For Your Level And Background. :pencil2:
User: faatehim
Home Page: http://explainmeplease.com/
crispr,ancestral reconstruction and likelihood analysis for CRISPR spacer arrays
User: fbaumdicker
crispr,Analysis package for processing counts from genome-wide CRISPR/Cas9 screens
User: felicityallen
crispr,A better, faster way to count guides in CRISPR screens.
Organization: fulcrumgenomics
Home Page: https://crates.io/crates/guide-counter
crispr,Python library for genome editing, CRISPR gRNA design and prediction
User: goosang-yu
crispr,Code for CRISPR activation screen with single-cell RNA-seq readout studying zygotic genome activation
User: gtca
crispr,CROPSR is a python tool designed for genome-wide gRNA design and evaluation for CRISPR experiments, with special focus on complex genomes such as those found in energy-producing crops. CROPSR is a product of the DOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI).
User: h2muller
crispr,An interactive exploration/visualization platform to help you lift the fog from your CRISPR analyses.
User: j-andrews7
Home Page: https://bioconductor.org/packages/release/bioc/html/CRISPRball.html
crispr,Tools for single-cell feature barcoding analysis
User: jlduan
Home Page: https://jlduan.github.io/fba/
crispr,A software tool for personalized and allele-specific CRISPR editing.
User: keoughkath
Home Page: https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1783-3
crispr,Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data
User: lucapinello
crispr,FlashFry: The rapid CRISPR target site characterization tool
Organization: mckennalab
crispr,A Snakemake workflow for the design of small guide RNAs (sgRNAs) for CRISPR applications.
Organization: mpusp
crispr,A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).
Organization: nf-core
Home Page: https://nf-co.re/crisprseq
crispr,A flexible and fast sgRNA counter from FASTQ Files
User: noamteyssier
Home Page: https://noamteyssier.github.io/sgcount
crispr,Base Editing screens' Activity-Normalized variant effect size estimation
Organization: pinellolab
Home Page: https://pinellolab.github.io/crispr-bean/
crispr,A gRNA database generation tool.
Organization: pritykinlab
Home Page: http://www.guidescan.com
crispr,Cutting-edge Full-stack AI Platform delivered as a SaaS (Software as a Service). Built on a robust technology stack, integrated with powerful APIs such as OpenAI and Replicate, offers a seamless experience for code generation, conversation simulation, image creation, music composition, and video generation.
User: ricardogesteves
crispr,A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more
User: rraadd88
crispr,CCTyper: Automatic detection and subtyping of CRISPR-Cas operons
User: russel88
Home Page: https://typer.crispr.dk
crispr,A guideRNA design tool for the modern era.
User: schmidt73
Home Page: https://guidescan.com
crispr,GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens
Organization: sellerslab
crispr,SpacePHARER CRISPR Spacer Phage-Host pAiRs findER
Organization: soedinglab
Home Page: https://spacepharer.soedinglab.org
crispr,Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif
User: sshen8
Home Page: https://peglit.liugroup.us
crispr,CRISPR Guide RNA Designer
User: subglitch1
crispr,Synthego ICE - Inference of CRISPR Editing software
Organization: synthego-open
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