Topic: metagenomic-pipeline Goto Github
Some thing interesting about metagenomic-pipeline
Some thing interesting about metagenomic-pipeline
metagenomic-pipeline,MAGqual is a command line tool to evaluate the quality of metagenomic bins and generate recommended metadata in line with the MIMAG standards
User: ac1513
metagenomic-pipeline,metaGEENOME is a 16S rRNA metagenomic analysis tool that encompasses nearly all steps of downstream analysis.
User: ahmed-a-mohamed
metagenomic-pipeline,iMAGine - In silico Metagenomics Pipeline
User: avishekdutta14
metagenomic-pipeline,MegaVir is a bioinformatic pipeline for virome characterization and genome assembly.
User: balazshorvathreal
metagenomic-pipeline,Projeto de análise metagenômica e metabolômica da microbiota de mulheres no climatério - LBBM UFOP
Organization: bioinfonupeb
metagenomic-pipeline,Metagenomic analysis of the project: "PROGRAMAÇÃO METABÓLICA INDUZIDA PELA SUPERLACTAÇÃO E SEUS EFEITOS NA ATIVAÇÃO DO INFLAMASSOMA NLRP3 E EXPRESSÃO DO MIR-155 EM MODELO EXPERIMENTAL DE RESISTÊNCIA À INSULINA"
Organization: bioinfonupeb
metagenomic-pipeline,EXPOSIÇÃO AGUDA AO CHUMBO E SUA RELAÇÃO COM ALTERAÇÕES NO STATUS REDOX E DISBIOSE INTESTINAL EM RATOS
Organization: bioinfonupeb
metagenomic-pipeline,MAPle provides three different modules for the analysis of paired-end short read metagenomic data
User: biosina
metagenomic-pipeline,The following codes are focused on microbiome analysis, alpha, beta and relative abundance differences.
User: brochado-kith
metagenomic-pipeline,MicrobiomeStat Tutorial Repository: This is a comprehensive resource for learning how to use the MicrobiomeStat package. It provides a step-by-step guide to effectively analyze complex microbiome data.
User: cafferychen777
Home Page: https://www.microbiomestat.wiki/
metagenomic-pipeline,This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
Organization: ebi-metagenomics
Home Page: https://www.ebi.ac.uk/metagenomics/
metagenomic-pipeline,A few scripts to help with the installation of MetaErg, the contig/bin annotation pipeline
User: finesim97
metagenomic-pipeline,MGKit: Metagenomics Framework
User: frubino
metagenomic-pipeline,A flexible metagenomic pipeline combining read-based, assemblies and MAGs with downstream analysis
Organization: giovannellilab
Home Page: https://giovannellilab.github.io/Geomosaic/
metagenomic-pipeline,A fast, efficient, and accurate functional and taxonomic meta-omic profiler built on Pufferfish and the ccdBG
User: hermidalc
metagenomic-pipeline,quantify-virome: identify and quantify viruses from metagenomic shotgun sequences
Organization: hivlab
metagenomic-pipeline,Simple Script for Metagenomics Analysis on NIG Supercomputer (National Institute of Genetics)
User: huyvanvnese
metagenomic-pipeline,WGS- Metasociomic- analysing bacterial social interactions in metagenomes of longitudinally collected samples of human microbiomes
User: jimmlucas
metagenomic-pipeline,Silva OTU count table merger
User: karamveerverma37
metagenomic-pipeline,Metagenomic binning based on Hi-C data
Organization: koszullab
Home Page: https://research.pasteur.fr/fr/software/meta3c-metahic/
metagenomic-pipeline,MAGset is a tool to analyze and compare MAGs of known species
Organization: laboratoriobioinformatica
metagenomic-pipeline,This project aims do describe and explore the metagenomes of fern species of the genus Azolla.
User: lauralwd
metagenomic-pipeline,Milk Metagenomics Analysis of Cow Milk Samples across Global sites Using Mothur
User: nerdverse2024
metagenomic-pipeline,🐋 The Living Oceans Metagenome Taxanomic Profiling tool (beta) is a metagenomic pipeine built to work on your local ocean
Organization: new-atlantis-labs
metagenomic-pipeline,A metagenome assembly and evaluation pipeline, focused on hi-fi long reads, but with support for lo-fi long reads and hybrid assemblies
User: nimauric
metagenomic-pipeline,This pipeline takes the raw metagenomic WGS reads as an input, assemble them, separate the contigs in MAGs, taxonomically classify the MAGs and quantify the ARGs in the MAGs. The pipeline is built using R Shiny and people can run end to end analysis by doing few clicks on the screen.
User: nirmal2310
metagenomic-pipeline,宏基因组预测
User: qingyuanfl
metagenomic-pipeline,:horse: CLinically Okay Metagenomic Pipeline :horse:
User: rcs333
metagenomic-pipeline,KOMB is a tool for fast identification of unitigs of interest in metagenomes. KOMB introduces the concept of a Hybrid Unitig Graph (an extension to compacted de Bruijn graphs) and relies on k-core and K-truss decomposition algorithms.
Organization: treangenlab
metagenomic-pipeline,A pipeline for metagenomic analysis
User: victorcalderon
Home Page: https://metagenomics.vcbio.tech
metagenomic-pipeline,Metagenomic opeRon Prediction pipeline. MetaRon presents the first pipeline for the prediction of metagenomic operons without any functional or experimental data.
User: zaidissa
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