Hello! I'm trying to install the code on a standard t2.2xlarge AWS instance with Ubuntu 22.04 LTS installed. These are the steps I've taken:
UnsatisfiableError: The following specifications were found to be incompatible with each other:
Output in format: Requested package -> Available versions
Package libgcc conflicts for:
bioconda::blast -> libgcc
bioconda::cd-hit -> libgcc
dglteam::dgl-cuda11.3 -> scipy -> libgcc
bioconda::infernal -> libgcc
Package libgcc-ng conflicts for:
bioconda::cd-hit -> libgcc-ng[version='>=10.3.0|>=12|>=9.3.0|>=7.3.0|>=4.9']
bioconda::mafft -> libgcc-ng[version='>=10.3.0|>=12|>=9.4.0|>=9.3.0|>=7.5.0|>=7.3.0']
bioconda::hhsuite -> libgcc-ng[version='>=10.3.0|>=12|>=9.4.0|>=9.3.0|>=7.5.0|>=7.3.0']
conda-forge::tqdm -> python[version='>=2.7'] -> libgcc-ng[version='>=10.3.0|>=11.2.0|>=7.5.0|>=7.3.0|>=7.2.0|>=12|>=9.4.0|>=9.3.0|>=4.9']
bioconda::blast -> libgcc-ng[version='>=10.3.0|>=12|>=9.4.0|>=9.3.0|>=7.5.0|>=7.3.0|>=4.9']
bioconda::cd-hit -> zlib[version='>=1.2.12,<1.3.0a0'] -> libgcc-ng[version='>=11.2.0|>=7.5.0|>=7.2.0']
python=3.8 -> zlib[version='>=1.2.11,<1.3.0a0'] -> libgcc-ng[version='>=4.9|>=7.2.0']
conda-forge::cudatoolkit=11.3 -> libgcc-ng[version='>=10.3.0|>=12|>=9.4.0']
bioconda::hmmer[version='>=3.3'] -> libgcc-ng[version='>=10.3.0|>=9.3.0|>=7.5.0|>=7.3.0']
requests -> python[version='>=3.8,<3.9.0a0'] -> libgcc-ng[version='>=10.3.0|>=11.2.0|>=7.5.0|>=7.3.0|>=12|>=9.4.0|>=9.3.0|>=7.2.0|>=4.9']
conda-forge::psutil -> python[version='>=3.9,<3.10.0a0'] -> libgcc-ng[version='>=11.2.0|>=7.2.0']
bioconda::hhsuite -> perl[version='>=5.32.1,<5.33.0a0',build=*_perl5] -> libgcc-ng[version='>=11.2.0|>=7.2.0|>=4.9']
bioconda::blast -> curl[version='>=7.83.1,<8.0a0'] -> libgcc-ng[version='>=11.2.0|>=7.2.0']
bioconda::infernal -> perl[version='>=5.32.1,<5.33.0a0',build=*_perl5] -> libgcc-ng[version='>=11.2.0|>=9.4.0|>=7.2.0']
conda-forge::psutil -> libgcc-ng[version='>=10.3.0|>=12|>=9.4.0|>=9.3.0|>=7.5.0|>=7.3.0|>=4.9']
bioconda::csblast -> libgcc-ng[version='>=10.3.0|>=9.3.0']
python=3.8 -> libgcc-ng[version='>=10.3.0|>=11.2.0|>=7.5.0|>=7.3.0|>=12|>=9.4.0|>=9.3.0']
dglteam::dgl-cuda11.3 -> numpy -> libgcc-ng[version='>=10.3.0|>=11.2.0|>=7.5.0|>=7.3.0|>=7.2.0|>=12|>=9.4.0|>=9.3.0|>=4.9']
bioconda::infernal -> libgcc-ng[version='>=10.3.0|>=9.3.0|>=7.5.0|>=7.3.0|>=4.9']
pytorch::pytorch -> blas=[build=mkl] -> libgcc-ng[version='>=10.3.0|>=12|>=9.4.0|>=9.3.0|>=7.5.0|>=7.3.0|>=11.2.0|>=7.2.0|>=4.9']
Package numpy conflicts for:
bioconda::blast -> boost[version='>=1.68.0,<1.68.1.0a0'] -> numpy[version='1.11.*|1.12.*|1.13.*|>=1.11|>=1.8|>=1.9.3,<2.0a0|>=1.9|>=1.7|>=1.23.4,<2.0a0|>=1.20.3,<2.0a0|>=1.21.6,<2.0a0|>=1.19.5,<2.0a0|>=1.21.5,<2.0a0|>=1.18.5,<2.0a0|>=1.21.4,<2.0a0|>=1.17.5,<2.0a0|>=1.16.6,<2.0a0|>=1.16.5,<2.0a0|>=1.19.4,<2.0a0|>=1.19.2,<2.0a0|>=1.14.6,<2.0a0']
pytorch::pytorch -> numpy[version='>=1.11|>=1.19']
dglteam::dgl-cuda11.3 -> networkx -> numpy[version='1.10.*|1.11.*|1.12.*|1.13.*|>=1.11|>=1.11.3,<2.0a0|>=1.14.6,<2.0a0|>=1.16,<1.23|>=1.19,<1.25.0|>=1.19|>=1.19,<1.26.0|>=1.21,<1.26.0|>=1.21,<1.25.0|>=1.21,<1.23|>=1.16.6,<1.23.0|>=1.21.2,<1.23.0|>=1.16.6,<2.0a0|>=1.15.1,<2.0a0|>=1.9.3,<2.0a0|>=1.21.6,<1.26|>=1.21.6,<2.0a0|>=1.23.4,<1.26|>=1.23.4,<2.0a0|>=1.20.3,<1.26|>=1.20.3,<2.0a0|>=1.19.5,<2.0a0|>=1.20.3,<1.25|>=1.21.6,<1.25|>=1.18.5,<2.0a0|>=1.21.5,<2.0a0|>=1.20.3,<1.23|>=1.21.6,<1.23|>=1.21.4,<2.0a0|>=1.17.5,<2.0a0|>=1.19.4,<2.0a0|>=1.16.5,<2.0a0|>=1.19.2,<2.0a0|>=1.18.1,<2.0a0|>=1.9']
dglteam::dgl-cuda11.3 -> numpy
Package tzdata conflicts for:
conda-forge::psutil -> python[version='>=3.11,<3.12.0a0'] -> tzdata
bioconda::hhsuite -> python[version='>=3.10,<3.11.0a0'] -> tzdata
conda-forge::tqdm -> python[version='>=2.7'] -> tzdata
dglteam::dgl-cuda11.3 -> python[version='>=3.9,<3.10.0a0'] -> tzdata
pytorch::pytorch -> python[version='>=3.10,<3.11.0a0'] -> tzdata
requests -> python[version='>=3.10,<3.11.0a0'] -> tzdata
Package ncurses conflicts for:
python=3.8 -> ncurses[version='>=6.1,<7.0.0a0|>=6.1,<7.0a0|>=6.2,<7.0a0|>=6.3,<7.0a0|>=6.2,<7.0.0a0']
python=3.8 -> readline[version='>=7.0,<8.0a0'] -> ncurses[version='5.9.*|6.0.*|>=6.0,<7.0a0']
Package _libgcc_mutex conflicts for:
bioconda::csblast -> libgcc-ng[version='>=10.3.0'] -> _libgcc_mutex[version='*|0.1|0.1',build='conda_forge|main']
bioconda::cd-hit -> _openmp_mutex[version='>=4.5'] -> _libgcc_mutex[version='*|0.1',build='conda_forge|main|main']
bioconda::hmmer[version='>=3.3'] -> libgcc-ng[version='>=10.3.0'] -> _libgcc_mutex[version='*|0.1|0.1',build='conda_forge|main']
bioconda::infernal -> libgcc-ng[version='>=10.3.0'] -> _libgcc_mutex[version='*|0.1|0.1',build='conda_forge|main']
python=3.8 -> libgcc-ng[version='>=11.2.0'] -> _libgcc_mutex[version='*|0.1|0.1',build='conda_forge|main']
conda-forge::psutil -> libgcc-ng[version='>=12'] -> _libgcc_mutex[version='*|0.1',build='conda_forge|main|main']
bioconda::mafft -> libgcc-ng[version='>=12'] -> _libgcc_mutex[version='*|0.1',build='conda_forge|main|main']
bioconda::blast -> libgcc-ng[version='>=12'] -> _libgcc_mutex[version='*|0.1',build='conda_forge|main|main']
conda-forge::cudatoolkit=11.3 -> libgcc-ng[version='>=12'] -> _libgcc_mutex[version='*|0.1',build='conda_forge|main|main']
bioconda::hhsuite -> _openmp_mutex[version='>=4.5'] -> _libgcc_mutex[version='*|0.1',build='conda_forge|main|main']
Package libffi conflicts for:
pytorch::pytorch -> python[version='>=3.10,<3.11.0a0'] -> libffi[version='3.2.*|>=3.2.1,<3.3.0a0|>=3.2.1,<3.3a0|>=3.3,<3.4.0a0|>=3.4,<3.5|>=3.4,<4.0a0|>=3.4.2,<3.5.0a0|>=3.3|<3.3.0.a0']
dglteam::dgl-cuda11.3 -> python[version='>=3.8,<3.9.0a0'] -> libffi[version='3.2.*|>=3.2.1,<3.3.0a0|>=3.2.1,<3.3a0|>=3.3,<3.4.0a0|>=3.4,<3.5|>=3.4,<4.0a0|>=3.4.2,<3.5.0a0']
python=3.8 -> libffi[version='>=3.2.1,<3.3.0a0|>=3.2.1,<3.3a0|>=3.3,<3.4.0a0|>=3.4,<3.5|>=3.4,<4.0a0|>=3.4.2,<3.5.0a0']
requests -> python[version='>=3.8,<3.9.0a0'] -> libffi[version='3.2.*|>=3.2.1,<3.3.0a0|>=3.2.1,<3.3a0|>=3.3,<3.4.0a0|>=3.4,<3.5|>=3.4,<4.0a0|>=3.4.2,<3.5.0a0']
conda-forge::psutil -> python[version='>=3.11,<3.12.0a0'] -> libffi[version='3.2.*|>=3.2.1,<3.3.0a0|>=3.3,<3.4.0a0|>=3.4,<3.5|>=3.4.2,<3.5.0a0|>=3.4,<4.0a0|>=3.2.1,<3.3a0']
bioconda::hhsuite -> python[version='>=3.10,<3.11.0a0'] -> libffi[version='3.2.*|>=3.2.1,<3.3.0a0|>=3.2.1,<3.3a0|>=3.3,<3.4.0a0|>=3.4,<3.5|>=3.4,<4.0a0|>=3.4.2,<3.5.0a0']
conda-forge::tqdm -> python[version='>=2.7'] -> libffi[version='3.2.*|>=3.2.1,<3.3a0|>=3.3,<3.4.0a0|>=3.4,<3.5|>=3.4,<4.0a0|>=3.4.2,<3.5.0a0|>=3.2.1,<3.3.0a0']
Package libblas conflicts for:
pytorch::pytorch -> blas=[build=mkl] -> libblas[version='3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.8.0|3.9.0|>=3.9.0,<4.0a0|>=3.8.0,<4.0a0',build='4_mkl|6_mkl|7_mkl|8_mkl|9_mkl|12_mkl|13_mkl|18_mkl|19_mkl|6_mkl|7_mkl|8_mkl|10_mkl|14_linux64_mkl|15_linux64_mkl|16_linux64_mkl|13_linux64_mkl|12_linux64_mkl|11_linux64_mkl|9_mkl|5_mkl|21_mkl|20_mkl|16_mkl|15_mkl|14_mkl|11_mkl|10_mkl|5_mkl']
dglteam::dgl-cuda11.3 -> numpy -> libblas[version='>=3.8.0,<4.0a0|>=3.9.0,<4.0a0']
Package gmp conflicts for:
bioconda::blast -> gnutls[version='>=3.6.5,<3.7.0a0'] -> gmp[version='6.1.*|>=6.1.2|>=4.2']
bioconda::cd-hit -> libgcc -> gmp[version='>=4.2']
bioconda::blast -> gmp[version='>=6.1.2,<7.0a0']
bioconda::infernal -> libgcc -> gmp[version='>=4.2']
Package libsqlite conflicts for:
python=3.8 -> libsqlite[version='>=3.40.0,<4.0a0']
python=3.8 -> sqlite[version='>=3.40.0,<4.0a0'] -> libsqlite[version='3.39.2|3.39.3|3.39.4|3.40.0|>=3.39.4,<4.0a0|>=3.39.2,<4.0a0',build='h753d276_0|h753d276_1']
Package _openmp_mutex conflicts for:
bioconda::csblast -> libgcc-ng[version='>=10.3.0'] -> _openmp_mutex[version='>=4.5']
bioconda::blast -> libgcc-ng[version='>=12'] -> _openmp_mutex[version='>=4.5']
conda-forge::cudatoolkit=11.3 -> libgcc-ng[version='>=12'] -> _openmp_mutex[version='>=4.5']
python=3.8 -> libgcc-ng[version='>=11.2.0'] -> _openmp_mutex[version='>=4.5']
bioconda::infernal -> libgcc-ng[version='>=10.3.0'] -> _openmp_mutex[version='>=4.5']
bioconda::cd-hit -> libgcc-ng[version='>=10.3.0'] -> _openmp_mutex
pytorch::pytorch -> blas=[build=mkl] -> _openmp_mutex[version='*|>=4.5',build=*_llvm]
bioconda::hhsuite -> _openmp_mutex[version='>=4.5']
bioconda::mafft -> libgcc-ng[version='>=12'] -> _openmp_mutex[version='>=4.5']
bioconda::hmmer[version='>=3.3'] -> libgcc-ng[version='>=10.3.0'] -> _openmp_mutex[version='>=4.5']
conda-forge::psutil -> libgcc-ng[version='>=12'] -> _openmp_mutex[version='>=4.5']
bioconda::hhsuite -> libgcc-ng[version='>=10.3.0'] -> _openmp_mutex
bioconda::cd-hit -> _openmp_mutex[version='>=4.5']
Package ca-certificates conflicts for:
conda-forge::psutil -> python[version='>=2.7,<2.8.0a0'] -> ca-certificates
requests -> python -> ca-certificates
pytorch::pytorch -> python[version='>=2.7,<2.8.0a0'] -> ca-certificates
conda-forge::tqdm -> python[version='>=2.7'] -> ca-certificates
bioconda::blast -> gnutls[version='>=3.6.5,<3.7.0a0'] -> ca-certificates
bioconda::hhsuite -> python[version='>=2.7,<2.8.0a0'] -> ca-certificates
python=3.8 -> openssl[version='>=1.1.1s,<1.1.2a'] -> ca-certificates
Package python conflicts for:
dglteam::dgl-cuda11.3 -> networkx -> python[version='2.7.*|3.5.*|3.6.*|>=2.7,<2.8.0a0|>=3.5|>=3.6|>=3.7|>=3.8|>=3.5,<3.6.0a0|3.4.*|>=3.11,<3.12.0a0|>=3.7,<4.0|>=3.6,<4.0|>=2.7']
dglteam::dgl-cuda11.3 -> python[version='>=3.10,<3.11.0a0|>=3.6,<3.7.0a0|>=3.7,<3.8.0a0|>=3.8,<3.9.0a0|>=3.9,<3.10.0a0']
python=3.8
conda-forge::psutil -> python_abi=3.11[build=*_cp311] -> python[version='3.10.*|3.11.*|3.9.*|3.8.*|3.7.*']
conda-forge::tqdm -> python[version='2.7.*|3.5.*|3.6.*|>=2.7,<2.8.0a0|>=2.7|>=3.6,<3.7.0a0|>=3.8,<3.9.0a0|>=3.7,<3.8.0a0|3.4.*']
conda-forge::tqdm -> colorama -> python[version='>=3.10,<3.11.0a0|>=3.9,<3.10.0a0|>=3.5,<3.6.0a0|>=3.7|>=3.6']
pytorch::pytorch -> python[version='>=2.7,<2.8.0a0|>=3.10,<3.11.0a0|>=3.8,<3.9.0a0|>=3.7,<3.8.0a0|>=3.9,<3.10.0a0|>=3.6,<3.7.0a0|>=3.5,<3.6.0a0']
requests -> certifi[version='>=2017.4.17'] -> python[version='3.7.*|3.8.*|<4.0|>=3.5|>=3.7']
bioconda::hhsuite -> python[version='>=2.7,<2.8.0a0|>=3.10,<3.11.0a0|>=3.8,<3.9.0a0|>=3.7,<3.8.0a0|>=3.9,<3.10.0a0|>=3.6,<3.7.0a0']
conda-forge::psutil -> python[version='2.7.*|3.5.*|3.6.*|>=2.7,<2.8.0a0|>=3.10,<3.11.0a0|>=3.11,<3.12.0a0|>=3.9,<3.10.0a0|>=3.8,<3.9.0a0|>=3.7,<3.8.0a0|>=3.6,<3.7.0a0|>=3.5,<3.6.0a0|3.4.*']
pytorch::pytorch -> typing_extensions -> python[version='2.7.*|3.5.*|3.6.*|3.9.*|>=3.11,<3.12.0a0|>=3.5|>=3.6|>=3.7|>=3.6,<3.7|3.4.*|3.9.10|3.8.12|3.7.12|3.7.10|3.7.10|3.6.12|3.7.9|3.6.12|3.6.9|3.6.9|3.6.9|3.6.9|>=3.8|>=3',build='0_73_pypy|2_73_pypy|4_73_pypy|0_73_pypy|0_73_pypy|1_73_pypy|5_73_pypy|5_73_pypy|3_73_pypy|1_73_pypy']
bioconda::hhsuite -> python_abi=3.10[build=*_cp310] -> python[version='2.7.*|3.10.*|3.8.*|3.7.*|3.9.*|3.6.*']
requests -> python[version='2.7.*|3.5.*|3.6.*|>=2.7,<2.8.0a0|>=3.10,<3.11.0a0|>=3.7,<3.8.0a0|>=3.8,<3.9.0a0|>=3.9,<3.10.0a0|>=3.6|>=3.6,<3.7.0a0|>=3.5,<3.6.0a0|>=3.7,<4.0|>=3.6,<4.0|3.4.*']
bioconda::blast -> boost[version='>=1.68.0,<1.68.1.0a0'] -> python[version='2.7.*|3.5.*|3.6.*|>=2.7,<2.8.0a0|>=3.6,<3.7.0a0|>=3.7,<3.8.0a0|>=3.5,<3.6.0a0|3.4.*|>=3.10,<3.11.0a0|>=3.9,<3.10.0a0|>=3.8,<3.9.0a0|>=3.11,<3.12.0a0']
Package mkl conflicts for:
pytorch::pytorch -> mkl[version='>=2018']
pytorch::pytorch -> blas=[build=mkl] -> mkl[version='>=2018.0.0,<2019.0a0|>=2018.0.1,<2019.0a0|>=2018.0.2,<2019.0a0|>=2018.0.3,<2019.0a0|>=2019.1,<2021.0a0|>=2019.3,<2021.0a0|>=2019.4,<2021.0a0|>=2021.2.0,<2022.0a0|>=2021.3.0,<2022.0a0|>=2021.4.0,<2022.0a0|>=2019.4,<2020.0a0']
Package libzlib conflicts for:
bioconda::cd-hit -> zlib[version='>=1.2.12,<1.3.0a0'] -> libzlib[version='1.2.11|1.2.11|1.2.11|1.2.12|1.2.12|1.2.12|1.2.12|1.2.12|1.2.13',build='h36c2ea0_1013|h166bdaf_0|h166bdaf_2|h166bdaf_3|h166bdaf_4|h166bdaf_1|h166bdaf_1014|h36c2ea0_1012']
python=3.8 -> zlib[version='>=1.2.13,<1.3.0a0'] -> libzlib[version='1.2.11|1.2.11|1.2.11|1.2.12|1.2.12|1.2.12|1.2.12|1.2.12|1.2.13|>=1.2.12,<1.3.0a0',build='h36c2ea0_1013|h166bdaf_0|h166bdaf_2|h166bdaf_3|h166bdaf_4|h166bdaf_1|h166bdaf_1014|h36c2ea0_1012']
python=3.8 -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.13,<1.3.0a0']
conda-forge::psutil -> python[version='>=3.11,<3.12.0a0'] -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.13,<1.3.0a0|>=1.2.12,<1.3.0a0']
bioconda::blast -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0']
bioconda::cd-hit -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0']
bioconda::hhsuite -> python[version='>=3.10,<3.11.0a0'] -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0']
bioconda::blast -> curl[version='>=7.83.1,<8.0a0'] -> libzlib[version='1.2.11|1.2.11|1.2.11|1.2.12|1.2.12|1.2.12|1.2.12|1.2.12|1.2.13|>=1.2.13,<1.3.0a0',build='h36c2ea0_1013|h166bdaf_0|h166bdaf_2|h166bdaf_3|h166bdaf_4|h166bdaf_1|h166bdaf_1014|h36c2ea0_1012']
requests -> python[version='>=3.8,<3.9.0a0'] -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.13,<1.3.0a0|>=1.2.12,<1.3.0a0']
conda-forge::tqdm -> python[version='>=2.7'] -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0']
pytorch::pytorch -> python[version='>=3.10,<3.11.0a0'] -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0']
dglteam::dgl-cuda11.3 -> python[version='>=3.8,<3.9.0a0'] -> libzlib[version='>=1.2.11,<1.3.0a0|>=1.2.13,<1.3.0a0|>=1.2.12,<1.3.0a0']
Package sqlite conflicts for:
python=3.8 -> sqlite[version='>=3.30.0,<4.0a0|>=3.30.1,<4.0a0|>=3.31.1,<4.0a0|>=3.32.3,<4.0a0|>=3.33.0,<4.0a0|>=3.35.4,<4.0a0|>=3.36.0,<4.0a0|>=3.38.0,<4.0a0|>=3.39.3,<4.0a0|>=3.40.0,<4.0a0|>=3.37.1,<4.0a0|>=3.37.0,<4.0a0|>=3.35.5,<4.0a0|>=3.34.0,<4.0a0']
python=3.8 -> pypy3.8=7.3.9 -> sqlite[version='>=3.38.2,<4.0a0|>=3.39.1,<4.0a0|>=3.39.2,<4.0a0']
Package perl conflicts for:
bioconda::blast -> entrez-direct -> perl[version='>=5.22.0,<5.23.0|>=5.26.2,<5.27.0a0|>=5.32.1,<6.0a0',build=*_perl5]
bioconda::blast -> perl[version='5.22.0.*|>=5.26.2,<5.26.3.0a0']
bioconda::hhsuite -> perl[version='>=5.26.2,<5.26.3.0a0|>=5.32.1,<5.33.0a0',build=*_perl5]
bioconda::infernal -> perl[version='>=5.32.1,<5.33.0a0',build=*_perl5]
Package pypy3.6 conflicts for:
requests -> certifi[version='>=2017.4.17'] -> pypy3.6[version='7.3.*|7.3.0.*|7.3.1.*|7.3.2.*|7.3.3.*|>=7.3.1|>=7.3.2|>=7.3.3']
pytorch::pytorch -> python[version='>=3.6,<3.7.0a0'] -> pypy3.6[version='7.3.0.*|7.3.1.*|7.3.2.*|7.3.3.*|>=7.3.1|>=7.3.3|>=7.3.2']
bioconda::blast -> boost -> pypy3.6[version='>=7.3.3']
bioconda::hhsuite -> python[version='>=3.6,<3.7.0a0'] -> pypy3.6[version='7.3.0.*|7.3.1.*|7.3.2.*|7.3.3.*']
dglteam::dgl-cuda11.3 -> numpy -> pypy3.6[version='7.3.0.*|7.3.1.*|7.3.2.*|7.3.3.*|>=7.3.1|>=7.3.2|>=7.3.3']
conda-forge::psutil -> python[version='>=3.6,<3.7.0a0'] -> pypy3.6[version='7.3.*|7.3.0.*|7.3.1.*|7.3.2.*|7.3.3.*']
conda-forge::tqdm -> python[version='>=2.7'] -> pypy3.6[version='7.3.0.*|7.3.1.*|7.3.2.*|7.3.3.*']
conda-forge::psutil -> pypy3.6[version='>=7.3.1|>=7.3.2|>=7.3.3']
Package xz conflicts for:
python=3.8 -> xz[version='>=5.2.4,<5.3.0a0|>=5.2.4,<6.0a0|>=5.2.5,<6.0a0|>=5.2.6,<6.0a0|>=5.2.5,<5.3.0a0']
python=3.8 -> pypy3.8=7.3.9 -> xz[version='>=5.2.6,<5.3.0a0']
Package blas conflicts for:
pytorch::pytorch -> numpy[version='>=1.19'] -> blas[version='*|1.0|1.0|1.1',build='openblas|mkl|openblas|openblas']
pytorch::pytorch -> blas=[build=mkl]
Package requests conflicts for:
dglteam::dgl-cuda11.3 -> requests
requests
Package expat conflicts for:
python=3.8 -> pypy3.8=7.3.9 -> expat[version='>=2.4.7,<3.0a0|>=2.4.8,<3.0a0|>=2.4.9,<3.0a0|>=2.5.0,<3.0a0']
conda-forge::psutil -> pypy3.9[version='>=7.3.9'] -> expat[version='>=2.2.9,<3.0.0a0|>=2.3.0,<3.0a0|>=2.4.1,<3.0a0|>=2.4.7,<3.0a0|>=2.4.8,<3.0a0|>=2.4.9,<3.0a0|>=2.5.0,<3.0a0']
Package psutil conflicts for:
dglteam::dgl-cuda11.3 -> psutil
conda-forge|conda-forge::psutil
conda-forge::psutil
Package libnsl conflicts for:
conda-forge::tqdm -> python[version='>=2.7'] -> libnsl[version='>=2.0.0,<2.1.0a0']
bioconda::hhsuite -> perl[version='>=5.32.1,<5.33.0a0',build=*_perl5] -> libnsl[version='>=2.0.0,<2.1.0a0']
conda-forge::psutil -> python[version='>=3.11,<3.12.0a0'] -> libnsl[version='>=2.0.0,<2.1.0a0']
bioconda::infernal -> perl[version='>=5.32.1,<5.33.0a0',build=*_perl5] -> libnsl[version='>=2.0.0,<2.1.0a0']
pytorch::pytorch -> python[version='>=3.10,<3.11.0a0'] -> libnsl[version='>=2.0.0,<2.1.0a0']
requests -> python[version='>=3.8,<3.9.0a0'] -> libnsl[version='>=2.0.0,<2.1.0a0']
bioconda::blast -> perl -> libnsl[version='>=2.0.0,<2.1.0a0']
python=3.8 -> libnsl[version='>=2.0.0,<2.1.0a0']
dglteam::dgl-cuda11.3 -> python[version='>=3.8,<3.9.0a0'] -> libnsl[version='>=2.0.0,<2.1.0a0']
Package cudatoolkit conflicts for:
conda-forge|conda-forge::cudatoolkit=11.3
pytorch::pytorch -> cudatoolkit[version='8.*|>=10.0,<10.1|>=10.1,<10.2|>=10.2,<10.3|>=11.3,<11.4|>=11.6,<11.7|>=11.5,<11.6|>=11.1,<11.2|>=11.0,<11.1|>=9.2,<9.3|>=9.0,<9.1|>=8.0,<8.1|9.*']
conda-forge::cudatoolkit=11.3
Package setuptools conflicts for:
python=3.8 -> pip -> setuptools
dglteam::dgl-cuda11.3 -> networkx -> setuptools
Package gdbm conflicts for:
bioconda::blast -> perl -> gdbm[version='>=1.18|>=1.18,<1.19.0a0']
python=3.8 -> pypy3.8=7.3.9 -> gdbm[version='>=1.18,<1.19.0a0']
conda-forge::psutil -> pypy3.9[version='>=7.3.9'] -> gdbm[version='>=1.18,<1.19.0a0']
Package clangdev conflicts for:
bioconda::cd-hit -> openmp -> clangdev[version='4.0.0|4.0.0|4.0.0.*|5.0.0|5.0.0.*']
bioconda::hhsuite -> openmp -> clangdev[version='4.0.0|4.0.0|4.0.0.*|5.0.0|5.0.0.*']
Package llvm-openmp conflicts for:
pytorch::pytorch -> blas=[build=mkl] -> llvm-openmp[version='>=10.0.0|>=11.0.0|>=11.0.1|>=11.1.0|>=12.0.1|>=13.0.1|>=14.0.4|>=15.0.6|>=14.0.3|>=9.0.1']
bioconda::cd-hit -> _openmp_mutex[version='>=4.5'] -> llvm-openmp[version='8.0.0|8.0.0|8.0.1|>=9.0.1',build='hc9558a2_0|hc9558a2_0|hc9558a2_1']
bioconda::hhsuite -> _openmp_mutex[version='>=4.5'] -> llvm-openmp[version='8.0.0|8.0.0|8.0.1|>=9.0.1',build='hc9558a2_0|hc9558a2_0|hc9558a2_1']
Package tqdm conflicts for:
dglteam::dgl-cuda11.3 -> tqdm
conda-forge::tqdm
conda-forge|conda-forge::tqdm
Package libstdcxx-ng conflicts for:
python=3.8 -> libstdcxx-ng[version='>=11.2.0|>=7.5.0|>=7.3.0|>=9.4.0|>=9.3.0']
python=3.8 -> libffi[version='>=3.2.1,<3.3a0'] -> libstdcxx-ng[version='>=4.9|>=7.2.0']
Package zlib conflicts for:
python=3.8 -> zlib[version='>=1.2.11,<1.3.0a0|>=1.2.12,<1.3.0a0|>=1.2.13,<1.3.0a0']
python=3.8 -> pypy3.8=7.3.9 -> zlib
Package blast-legacy conflicts for:
biocore::blast-legacy=2.2.26
biocore|biocore::blast-legacy=2.2.26
biocore::psipred=4.01 -> blast-legacy==2.2.26The following specifications were found to be incompatible with your system:
- feature:/linux-64::__glibc==2.35=0
- feature:|@/linux-64::__glibc==2.35=0
- bioconda::blast -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17']
- bioconda::cd-hit -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17']
- bioconda::csblast -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17']
- bioconda::hhsuite -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17']
- bioconda::hmmer[version='>=3.3'] -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17']
- bioconda::infernal -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17']
- bioconda::mafft -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17']
- conda-forge::cudatoolkit=11.3 -> __glibc[version='>=2.17,<3.0.a0']
- conda-forge::cudatoolkit=11.3 -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17']
- conda-forge::psutil -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17']
- pytorch::pytorch -> cudatoolkit[version='>=11.3,<11.4'] -> __glibc[version='>=2.17,<3.0.a0']
Your installed version is: 2.35
Note that strict channel priority may have removed packages required for satisfiability.
I've also tried doing the same on the standard Pytorch 13.1 deep learning AMI for AWS and have run into the same issue. What am I doing wrong here?