thejacksonlaboratory Goto Github PK

image_upload_service

Basic image uploading sevice for handling submission of very large image files with metadata.

imagefeature

Code used with DNN to explore the Image Features in renal histology images

images-as-signals

code and data for 'Intermediate Image Analysis - Images as Signals' workshop

imc-preprocessor

Simple python app to quickly pre-process Imaging Mass Cytometry data for visualization and segmentation.

interop

C++ Library to parse Illumina InterOp files

intro-to-bash

This is a tutorial for basic and intermediate unix skills.

intro-to-google-cloud

Introduction to Google Cloud Platform workshop

intro-to-hpc

An introduction to HPC

introtohpc

HPC and queue usage class syllabus

isopretem

isopretgo

Isoform function prediction and interpretation

jac_do_kidney

jax-bootstrap

JAX custom Bootstrap 4 theme

jax-cnv

Official code repository for JAX-CNV

jax-jupyter

Jackson Labs hands-on workshop material for using Jupyter Notebooks on CloudOS

jax-ng-light

Light Angular Material Theme for The Jackson Laboratory

jax-omero-transfer

Transfer OMERO datsets from the Research server to the Public server.

jax-omero-zarrconv

Containerizing converting OMERO images to Zarr

jax-omerometrics

Repo for generating OMERO reports/dashboards

jax-omeroutils

A module and scripts for working with OMERO

jax-single-cell

A curated space for the JAX Single Cell Community of Practice

jax-slurm-gcp

Scalable Slurm Cluster for GCP with some JAX bits sprinkled in.

jax-theme

Color palettes and typography for web projects at The Jackson Laboratory

jax_microbiome_workshop

Website

jaxbd2k-shortcourse

This repository contains course materials from JAX-BD2K workshop.

jaxid_generator

Microbiome-Core JAXid tracking ID code generator and view/search web app

jobhis

json_schema_generator

A simple json schema generator from any json source

jupyterhub-dockerspawner

jupyterhub-for-workshops