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json_schema_generator

A simple json schema generator from any json source

jupyterhub-dockerspawner

jupyterhub-for-workshops

jupyterhub-on-gke

jupyterhub-swarm

Jupyterhub deployment for workshops and courses

jupyterhub-workload-identity-gke

kcet

kinase cancer embedding tool

komp_images_etl

komp_omero_keys

Script for generating annotation keys for KOMP images in OMERO

korstanjelab_publications

Supplements for Korstanje Lab publications

lama_workflow

Repo with the inner workings for a container-based LAMA workflow.

lcgbs_wf

li-lab

Documentation hub for JAX Li lab pipelines, tools, and software

lirical

LIkelihood Ratio Interpretation of Clinical AbnormaLities

loinc2hpoannotation

loinc2hpo Annotation Data

loinchpo

Python version of LOINC2HPO

long-read-workshop

Long-Read Sequencing Workshop

long-read-workshop-2019

https://thejacksonlaboratory.github.io/long-read-workshop-2019/

ma-genta

Targeted Probe Design Pipeline. Using mWGS genome bin clusters, prokka annotation predictions, and blast+ databases for generation, processing and filtering probe sequences.

mac-terminal-shorcuts

marea

Filter PubMed articles for relevance

mbiome_containers

Docker and Singular container definition files, as used by the MbiomeCore at JAX-GM

mergegtfs

For non-redundant merging of transcript records from GTF2.2 files

meta_mapper

Map fields in existing metadata documents to those in new, standardized templates.

metadata_mongo_ingester

Generic tool for ingesting metadata into a user-named mongoDB and document, with optional validation against a schema

methclone

mia-sig

Multiplex chromatin interaction analysis by signal processing and statistical algorithms

microbiome-session

microbiome-shell-novice

microbiome-workshop