Topic: cromwell Goto Github
Some thing interesting about cromwell
Some thing interesting about cromwell
cromwell,Client for the Cromwell workflow engine
User: antonkulaga
cromwell,Omics Flow Builders, such as Cromwell (Java), Nextflow (Java), Snakemake (Python).
User: benben-miao
cromwell,BSF ATAC-seq pipeline
User: berguner
cromwell,CLI for interacting with Cromwell servers
Organization: broadinstitute
cromwell,Rich IDE support for Workflow Description Language
Organization: broadinstitute
cromwell,A command-line tool for executing, managing, and querying WDL workflows on Cromwell servers.
Organization: broadinstitute
cromwell,Robust Eukaryotic Annotation Toolkit
Organization: ei-corebioinformatics
Home Page: https://reat.readthedocs.io/en/latest/
cromwell,Focused on constructing a phylogenetic tree from Philippine strains of Candida albicans.
User: faithgriffin
cromwell,A repo containing instructions for running a Cromwell server on Gizmo at the Fred Hutch. (Contact Amy Paguirigan for questions)
Organization: fredhutch
cromwell,Setting up Cromwell + AWS GWF (Genomics Workflows)
User: hisplan
cromwell,An example implementation for the Cromwell workflow management system on PBS Pro
User: jlboat
cromwell,Automated and reproducible tool for identifying genomic variants at scale ☕️
Organization: labbcb
Home Page: https://bcblab.org/espresso-caller
cromwell,Configure workflow/pipeline tests using yaml files.
Organization: lumc
Home Page: https://pytest-workflow.readthedocs.io/en/stable/
cromwell,Web-based interface to the NMDC EDGE platform
Organization: microbiomedata
Home Page: https://nmdc-edge.org
cromwell,Example Repository for setting up GitHub Actions for WDL and CWL workflows for CI/CD
User: nolwarre
cromwell,Workflow Description Language - Specification and Implementations
Organization: openwdl
Home Page: https://www.openwdl.org/
cromwell,Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
User: seandavi
Home Page: https://seandavi.github.io/wdlRunR
cromwell,An opinionated Cromwell orchestration manager.
Organization: stjudecloud
Home Page: https://stjudecloud.github.io/oliver
cromwell,Create WDL documentation using Markdown.
Organization: stjudecloud
cromwell,Bioinformatics workflows developed for and used on the St. Jude Cloud project.
Organization: stjudecloud
cromwell,ACES is a workflow to query small sequences in a large set of genomes. It provides several outputs including BLAST results, a multiple sequence alignment file, a graphical fragment assembly file, and a phylogenetic tree file.
Organization: tnturnerlab
Home Page: https://pubmed.ncbi.nlm.nih.gov/34601580/
cromwell,Workflow pipelines for the Solita TRE
Organization: wsi-hgi-tre
cromwell,Cromwell pipelines for human genetic data
Organization: wtsi-hgi
cromwell,Containerisation-agnostic LSF execution configuration for Cromwell
Organization: wtsi-hgi
cromwell,Reconstructed archive of Gentoox-Loader (Cromwell fork)
Organization: xboxdev
cromwell,An integrated analysis platform for efficiently achieving computational reproducibility
User: yjcyxky
Home Page: https://choppy.readthedocs.io/en/latest/
cromwell,Determining reproducibility of Epigenomic signal for Answer ALS
User: yogionbioinformatics
cromwell,Dashboard for better visual at workflows on Cromwell server
User: yunhailuo
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