Topic: salmon Goto Github
Some thing interesting about salmon
Some thing interesting about salmon
salmon,Scripts accompanying manuscript "The genomic basis of reproductive and migratory behaviour in a polymorphic salmonid"
User: atigano
salmon,Performed a differential gene expression analysis with RNA-seq that compares the expression in human control breast cancer cell lines with lines treated by silencing the NRDE2 gene. A Salmon + tximport + DESeq2 workflow was conducted to pursue this.
User: bissessk
salmon,Code and scripts for the RNA-seq analysis of project: SMG5-SMG7 authorize nonsense-mediated mRNA decay by enabling SMG6 endonucleolytic activity
User: boehmv
Home Page: http://www.uni-koeln.de/math-nat-fak/genetik/groups/Gehring/#home
salmon,Code and scripts for the RNA-seq analysis of project: Deciphering the cellular roles and dissecting functional regions of UPF3A and UPF3B in human NMD
User: boehmv
Home Page: http://www.uni-koeln.de/math-nat-fak/genetik/groups/Gehring/#home
salmon,π π£ π± Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
Organization: combine-lab
Home Page: https://combine-lab.github.io/salmon
salmon,An R package for hosting data & code, and for running the Dam Impact Analysis (DIA) developed by Nieland et al. (2015)
User: danstich
salmon,Code for smooth interactions with the salvage database
Organization: dapperstats
Home Page: https://salvage.fish
salmon,Density of juvenile salmon in Caithness rivers - R-shiny dashboard
User: fionacarson
Home Page: https://e4z4az-fiona-carson.shinyapps.io/fish_dashboard/
salmon,A 3D game about being a salmon who makes the incredible journey from the ocean back up to his spawning grounds.
User: galaxypickle
salmon,an unfinished game I worked on for my Distributed Computing class in high school
User: gusg21
salmon,Count your fastq-formatted rna-seq reads with Salmon
Organization: gustaveroussy
salmon,SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances
User: hyunhwan-jeong
salmon,A JavaScript interpreter for Homespring
User: iamcal
salmon,μ°μ΄λ΄ - SalmonBot
Organization: infiniteteam
salmon,Datasets and related knowledge from the IYS Salmon Status and Trends workshops
Organization: int-salmon-data-lab
salmon,Project to detect and classify fish in a river
User: jarleven
salmon,docker file for genomic tools
User: jianhong
Home Page: https://jianhong.github.io/genomictools/
salmon,Population genetics using microsatellites for different salmonid species
User: katieb314
salmon,Development site for an integrated population model for Auke Creek coho salmon
User: mdscheuerell
salmon,Jupyter notebooks for DGE results and ontology analysis and visualisation.
User: michalbukowski
salmon,Simple Nextflow RNA-Seq pipeline
User: michalbukowski
salmon,Bioc2022 workshop. SEESAW: Statistical Estimation Of Allelic Expression Using Salmon And Swish
User: mikelove
Home Page: https://mikelove.github.io/Bioc2022AllelicExpression/
salmon,Data-driven salmon fishing
User: nickcrews
salmon,Python client for the CAX API. Holmes, E. E and M. Williams. 2023. pycax: a Python client for the Coordinated Assessments data exchange REST API
Organization: noaa-nwfsc
Home Page: https://noaa-nwfsc.github.io/pycax/
salmon,PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.
Organization: novartis
salmon,Dynamic Model
Organization: nwfsc-math-bio
salmon,This is an R package that runs the standardized trends metrics used in the 5-year Viability Reports for listed PNW salmonids.
Organization: nwfsc-math-bio
Home Page: https://nwfsc-math-bio.github.io/NWCTrends
salmon,Spawner and fraction wild data for the NWFSC Status Reviews.
Organization: nwfsc-math-bio
Home Page: https://nwfsc-math-bio.github.io/VRData/
salmon, Mise Γ jour et standardisation des sΓ©ries chronologiques d'abondance du saumon atlantique sur les cours d'eau de l'ORE DiaPFC
Organization: ore-diapfc
Home Page: https://www6.inra.fr/diapfc
salmon,Tables for the ICES Working Group on North Atlantic Salmon (WGNAS) for the ORE-DiaPFC rivers
Organization: ore-diapfc
Home Page: https://www6.inra.fr/diapfc
salmon,OStatus Specification
Organization: ostatus
Home Page: https://ostatus.github.io/spec/OStatus%201.0%20Draft%202.html
salmon,A simple site about dams.
User: pdxpcs
Home Page: https://pdxpcs.github.io/
salmon,A salmon plugin for WordPress
User: pfefferle
Home Page: https://wordpress.org/plugins/salmon/
salmon,Administration tools and utilities used by the PSC Coho Technical Committee to administer FRAM model runs.
Organization: psc-cotc
salmon,Evaluating HISAT2, Salmon and Kallisto alignment using Checkpoint Blockade treated CT26 Experimental Data
User: sk7-dotcom
salmon,CoExp website is a web-based tool developed in .NET Core Framework, for querying 109 independent gene co-expression networks from the family of CoExp R packages.
User: soniaruiz
Home Page: https://rytenlab.com/coexp/
salmon,Salmon in the Web
User: sotamakino
Home Page: https://salmon.vercel.app/
salmon,Snakemake workflow for Salmon quantification and FastQC quality controls
User: tdayris-perso
salmon,Perform differential analysis from FastQ files with Salmon, tximport, and DESeq2
User: tdayris-perso
salmon,Differential expression and allelic analysis, nonparametric statistics
Organization: thelovelab
Home Page: https://thelovelab.github.io/fishpond
salmon,This is a code tutorial for rna or dna sequence mapping by myself-RyanYip
User: yejg2017
salmon,RNAseq pipeline centered on Salmon
User: yyoshiaki
Home Page: https://doi.org/10.5281/zenodo.4718200
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