Topic: multiqc Goto Github
Some thing interesting about multiqc
Some thing interesting about multiqc
multiqc,A simple fastp-MultiQC nextflow pipeline
User: angelovangel
multiqc,The repository contain directories of projects done during the bioinformatics degree program
User: anita-brzoza
multiqc,One liner tool to check the quality of your single-cell atlases.
Organization: becavin-lab
Home Page: https://checkatlas.readthedocs.io/en/latest/
multiqc,RNA-seq, smRNA-seq, scRNA-seq & ATAC-seq workflows for @Cornell-Trex
User: bixbeta
multiqc,CCBR pipeline for preliminary QC and peak calling from ATACseq datasets
Organization: ccbr
Home Page: https://ccbr.github.io/ASPEN/
multiqc,Classification of RNA-Seq samples using circRNA expression
User: cgodatascience
multiqc,Estimate fastq-formatted read abundace in RNA-Seq analysis with Kallisto
Organization: gustaveroussy
multiqc,Count your fastq-formatted rna-seq reads with Salmon
Organization: gustaveroussy
multiqc,Quality Control, Mapping and Reads Count for RNA-Seq Analysis
User: hanielcedraz
multiqc,A Snakemake Workflow for using PolyA_DB and UCSC LiftOver with CellRanger
Organization: ims-bio2core-facility
multiqc,Exploring Bioinformatics pipelines
User: ineelhere
Home Page: https://ineelhere.github.io/bioinformatics/
multiqc,TaxTriage is a Nextflow workflow designed to agnostically identify and classify microbial organisms within short- or long-read metagenomic NGS data. This flexible tool was developed with various use-cases of mNGS in mind.
Organization: jhuapl-bio
multiqc,Walks through installation and usage of FASTQC, MultiQC, Trimmomatic, and Salmon for transcriptomic data preprocessing. Includes Grid Engine shell scripts that can be looped over many files in a directory.
User: julianneyang
multiqc,A Snakemake workflow for quality control assessment of Illumina NGS data using FastQC and MultiQC
User: kevin-wamae
multiqc,Using Quarto within Nextflow to make a MultiQC report
User: mahesh-panchal
multiqc,Build Docker container for MultiQC and (optionally) convert to Apptainer/Singularity.
User: mattgalbraith
multiqc,Generation Quality Controls Files for MSK-ACCESS
Organization: msk-access
Home Page: https://cmo-ci.gitbook.io/access-quality-control-v2/
multiqc,Code for basic MultiQC API service, providing run-time information about available updates.
Organization: multiqc
Home Page: https://api.multiqc.info
multiqc,A miniature example of a MultiQC plugin.
Organization: multiqc
Home Page: http://multiqc.info
multiqc,Aggregate results from bioinformatics analyses across many samples into a single report.
Organization: multiqc
Home Page: http://multiqc.info
multiqc,Test data for MultiQC.
Organization: multiqc
Home Page: https://multiqc.info
multiqc,A pipeline to investigate horizontal gene transfer from NGS data
Organization: nf-core
Home Page: https://nf-co.re/hgtseq
multiqc,A workflow automation script: demultiplex the library sequence, run quality checks, deliver to archiving and processing afterwards
Organization: norwegianveterinaryinstitute
multiqc,Docker to run multiqc for combining bioinformatic log reports
User: nuno-agostinho
multiqc,AlphaFold-based Protein Analysis Pipeline
User: otimusone
multiqc,Run multiple metagenome filtering programs using Docker containers
User: reslp
multiqc,nice utility methods for Nextflow pipelines
User: stevekm
multiqc,Report summary statistics relating to quality of bam files with Nextflow
Organization: sydney-informatics-hub
multiqc,Snakemake workflow for Salmon quantification and FastQC quality controls
User: tdayris-perso
multiqc,Map and post-process your bams for SNP calling
User: tdayris-perso
multiqc,Align reads over a reference genome, filter aligned-reads, and mark duplicates
User: tdayris
multiqc,Adding Salmon-based Modules to MultiQC
User: yash199
multiqc,This is a code tutorial for rna or dna sequence mapping by myself-RyanYip
User: yejg2017
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