Topic: singlecell Goto Github
Some thing interesting about singlecell
Some thing interesting about singlecell
singlecell,R function to generate a circos-style ggplot from single-cell TCR data.
User: aislyn
singlecell,Inference algorithms for the Poisson-Beta model
User: aksarkar
singlecell,
User: aksarkar
Home Page: https://aksarkar.github.io/singlecell-ideas/
singlecell,
User: aksarkar
Home Page: https://aksarkar.github.io/singlecell-modes
singlecell,Regulatory networks with Direct Information in python
Organization: aristoteleo
singlecell,Tutorials of Scribe Python package usage cases
Organization: aristoteleo
singlecell,🍊🔬 Orange add-on for gene expression of single cell data
Organization: biolab
Home Page: https://singlecell.biolab.si/
singlecell,RNA-seq, smRNA-seq, scRNA-seq & ATAC-seq workflows for @Cornell-Trex
User: bixbeta
singlecell,Blue Brain Python Electrical Modeling Pipeline
Organization: bluebrain
Home Page: https://bluepyemodel.readthedocs.io/
singlecell,Single Nuclei RNA Sequencing analysis of MND muscle cultures for the paper "Impaired signaling for neuromuscular synaptic maintenance is a feature of Motor Neuron Disease" by Ding et al, published in Acta Neuropathologica Communications.
User: cadaei-yuvxvs
Home Page: https://cadaei-yuvxvs.github.io/snRNAseq_muscle_MND/
singlecell,Demultiplexing pipeline for sequencing data
User: csawye01
singlecell,An R package for cell type prediction from single cell omics data
User: ddiez
Home Page: https://ddiez.github.io/celltype/
singlecell,Version 2.1.0 released
User: debsin
singlecell,Breast Cancer Single Cell Atlas
User: dibbelab
singlecell,Interactive software tool for the assignment of cell types in single-cell studies.
User: euxhenh
Home Page: https://cellar.cmu.hubmapconsortium.org/app/cellar
singlecell,Single cell type annotation guided by cell atlases, with freedom to be queer
Organization: fabilab
Home Page: https://northstar.readthedocs.io/
singlecell,Visualize expression of genes of interest after Conos.Cluster has been ran.
Organization: genepattern
singlecell,hatpal is an R package for alternative polyadenylation (APA) identification & analysis using 3’ scRNA-seq (10x etc.).
User: hhengug
singlecell,Large-scale Benchmarking of Single-cell Differential Expression Analysis Methods
User: himelmallick
singlecell,R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)
Organization: imb-computational-genomics-lab
singlecell,Python tool for alignment of spatial transcriptomics (ST) data using diffeomorphic metric mapping
Organization: jefworks-lab
Home Page: https://jef.works/STalign/
singlecell,Python version of DISCO toolkit
Organization: jinmiaochenlab
Home Page: http://www.immunesinglecell.org/
singlecell,Pipeline for flow cytometry anlaysis
User: luglilab
singlecell,A effort to collect all of the scRNA imputation methods and allow them to interface with scRNA-seq libraries (i. e. Seurat, SingleCellAssay, etc...)
User: milescsmith
singlecell,Single Cell Analysis course at Cold Spring Harbor Laboratory 2017
User: olgabot
singlecell,OmicsSuite website for releasing new version.
Organization: omicssuite
Home Page: https://omicssuite.github.io/
singlecell,Benchmarking computational single cell ATAC-seq methods
Organization: pinellolab
singlecell,STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
Organization: pinellolab
Home Page: http://stream.pinellolab.org
singlecell,Low-dimensional Projection of Single Cell Velocity
User: qiaochen
singlecell,A Shiny app for visualizing and exploring single cell RNA-sequencing data
User: sjessa
singlecell,RZiMM: A Regularized Zero-inflated Mixture Model for scRNA-seq Data
User: skadieye
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