Topic: influenza Goto Github
Some thing interesting about influenza
Some thing interesting about influenza
influenza,KDHE Influenza A pipeline, built to take MinIon fastq files and produce clade analysis
User: adrianlimag
influenza,Accompanies the manuscript "Spatial aggregation choice in the era of digital and administrative surveillance data"
Organization: bansallab
influenza,Integrating genotypes and phenotypes improves long-term forecasts of seasonal influenza A/H3N2 evolution
Organization: blab
Home Page: https://doi.org/10.7554/eLife.60067
influenza,Workflows and scripts for the assembly and analysis of influenza whole genome amplicon sequencing.
Organization: cdphe-bioinformatics
influenza,🛡Crowd-sourced COVID-19 reporting and assessment system.
Organization: cotect
Home Page: https://get.cotect.app/
influenza,Data set for Flu cases in Maryland, United States
User: dataguy2020
influenza,stochastic modeling | HMM
User: ecoronado92
Home Page: https://ecoronado.github.io/
influenza,Data on US ILI, influenza pos lab tests, and total influenza cases from 1998-2019
Organization: emergent-epidemics
influenza,A Python script that sends Italian flu updates to Mastodon
User: emmecola
influenza,An experimental deep learning & genotype network-based system for predicting new influenza protein sequences.
User: ericmjl
Home Page: https://fluforecaster.herokuapp.com/
influenza,Shiny app for FSN model comparison
Organization: flusightnetwork
influenza,Dataset of Influenza Incidence and Wikipedia Pagecounts (and Pageviews).
Organization: flutn
influenza,TCR analysis for COVID and Influenza A M1 epitope
User: garywang7
influenza,The Flexible Epidemic Modeling Pipeline
Organization: hopkinsidd
Home Page: https://flepimop.org
influenza,Query the 'CMU' 'DELPHI' Epidemiological Data 'API' (package wrapper https://github.com/cmu-delphi/delphi-epidata/blob/master/src/client/delphi_epidata.R)
User: hrbrmstr
influenza,🌏Record the last days of this earth. Don't they know this's the end of the world. It ended when you say good-bye.
User: hugetiny
Home Page: https://endof.world
influenza,Heatmap showing the number of deaths month to month since the beginning of the pandemic.
User: iamjuniorb
influenza,Pipeline for analyses of multiple pathogens, like SARS-CoV-2 with positivity rate analyses
Organization: institutotodospelasaude
Home Page: https://www.itps.org.br/pesquisa/monitoramento-de-patogenos-respiratorios
influenza,NGS pipeline for influenza virus libraries
Organization: iri-uw-bioinformatics
influenza,Influenza A Full-Length Consensus Calling for Nanopore Sequencing Data
User: jimmyliu1326
influenza, A Discrete-time Markov Process for Predicting Influenza Evolution.
User: jon-mah
influenza,DeepAR implementation for seasonal influenza cases in German districts
User: kai-ref
influenza,A R statistical software package for estimating attributable influenza morbidity & mortality
User: kmcconeghy
Home Page: https://kmcconeghy.github.io/flumodelr/
influenza,SIRV disease model of the impacts of vaccination on a hypothetical influenza outbreak, based on a recreation of the paper, Impact of influenza vaccine-modified infectivity on attack rate, case fatality ratio, and mortality (Nah et al. 2020)
User: kmiller222
Home Page: https://kmiller222.github.io/bi382_remodeling_project/
influenza,An adapted SEIR model which accounts for three immunity levels, one for naive infections, one for vaccinated infections and one for people with prior immunity. We begin with the population model then account for an age structure by splitting each compartment into 4 age groups. We then account for four different social distancing measures.
User: lauren-adams6
influenza,Stochastic integration of influenza dynamics.
User: ldeecke
influenza,Import script needed to build FluPRINT database from source :computer:
User: login-
Home Page: https://fluprint.com
influenza,Shiny App: Project CovFlu - A Comparative Exploration of Covid-19 and Influenza Demographics in the U.S.
User: maevadevs
influenza,Flu clade and mutation frequencies
Organization: nextstrain
Home Page: https://flu-frequencies.vercel.app
influenza,Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
Organization: nextstrain
Home Page: https://clades.nextstrain.org
influenza,Contains Weekly Activites for the (ISTE 740) Geographic Information Sciences and Technologies Course @ RIT
User: nirbhayph
influenza,Gene and Primer Sequence Analysis for SARS-CoV-2, EGFR(Non Small Lung Cancer Cell), Influenza DNAs ### How can I check my Oligo primers to ensure there are no significant primer design issues? - The difference between melting temperatures (Tm) of the primers should be less than 5°C. - The GC content should be between 35-80% or equivalent to the product being amplified. - The Delta G value of any self-dimers, hairpins, and heterodimers should be weaker (more positive) than -9.0 kcal/mole. Positive numbers indicate that the actual secondary structure shown will not form at all. - Avoid 3' complementarity between the two primers to prevent primer dimers. The IDT OligoAnalyzer APIs can be used to assess these different criteria for a proposed oligo. #### [Reference](https://sg.idtdna.com/pages/support/faqs/how-can-i-check-my-pcr-primers-using-the-oligoanalyzer-program-to-ensure-there-are-no-significant-primer-design-issues-)
User: owaiskhan9654
Home Page: https://www.kaggle.com/code/owaiskhan9654/gene-sequence-analysis-for-sars-cov-egfr-influenza
influenza,Prediction infectious strains of Influenza A virus for human
User: raghavagps
Home Page: http://webs.iiitd.edu.in/raghava/fluspred
influenza,Influenza forecasts visualizer
Organization: reichlab
Home Page: http://reichlab.io/flusight/
influenza,Linked Multilocus Genotype by Sequencing (LMGSeq) applied to high-throughput quantification of genetic exchange among diverse human Influenza A virus strains
User: sociovirology
influenza,Learning R by trying to replicate the charts available at https://www.cdc.gov/flu/weekly/ . Visualization available at
User: socket-var
Home Page: https://saketh.shinyapps.io/CDC_Flu_Analysis/
influenza,linfluencer degrees
User: tom-sapletta-com
Home Page: https://tom-sapletta-com.github.io/linfluencer/
influenza,MPH Capstone Data Management & Analysis
User: tyg3rr
influenza,vSNP -- validate SNPs
Organization: usda-vs
influenza,We apply combinatorial mutagenesis and next-generation sequencing to characterize the local fitness landscape in an antigenic region of NA in six different human H3N2 strains that were isolated around 10 years apart. This pipeline is used to analyze data and plotting.
User: wangyiquan95
influenza,RECDS identifies cluster-transition determining sites underlying the antigenic evolution of seasonal influenza viruses
Organization: wuaipinglab
Home Page: https://academic.oup.com/mbe/article-abstract/36/6/1172/5372682
influenza,Examples of Molecular Phylogenomics figures created from self-taught usage of MEGA-X software.
User: yogionbioinformatics
Home Page: https://en.wikipedia.org/wiki/Phylogenomics
influenza,Competition entry: DataDriven_Flu
User: yrodriguezmd
influenza, The mathematical modeling of the optimal strategy for influenza vaccination was studied using a transmission dynamics model that considered population movement, province, and age group
User: zeroxmu
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