Topic: snps Goto Github
Some thing interesting about snps
Some thing interesting about snps
snps,Modular workflow for Microbial Variant Calling and SNP diagnostics.
User: alipirani88
Home Page: https://alipirani88.github.io/snpkit/
snps,tools for reading, writing, merging, and remapping SNPs
User: apriha
snps,Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model
User: aquaskyline
snps,Most up-to-date scripts used in the Palumbi lab
User: bethsheets
snps,Datastructures and algorithms for working with genetic variation
Organization: biojulia
snps,Broad fungal method repository
Organization: broadinstitute
snps,Pan-genomic sequence analysis
User: chadlaing
Home Page: http://lfz.corefacility.ca/panseq
snps,Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform
User: chgibb
Home Page: https://chgibb.github.io/PHATDocs
snps,A fast 23andMe genome text file parser, now superseded by arv
User: cslarsen
snps,Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
User: edgardomortiz
snps,strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
User: ericarcher
snps,Analysis of regulatory impacts of autism-associated SNPs on biological pathways in the fetal and adult cortex.
Organization: genome3d
snps,An Open Source Web Application for Genetic Data (SNPs) Data Crawling
User: glasgowm148
Home Page: http://www.phenotype.dev
snps,Case-control genetics datasets evolved to be epistatic
Organization: greenelab
Home Page: https://doi.org/b44mk9
snps,A simple python library to identify the most likely strain from the population
Organization: gregor-mendel-institute
Home Page: https://arageno.gmi.oeaw.ac.at/
snps,Visualizing the effect of SNPs on protein structure using iCn3D
Organization: hackathonismb
snps,Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
User: huwenboshi
Home Page: http://bogdan.bioinformatics.ucla.edu/software/hess/
snps,Visualize microbial evolution at the SNP level!
User: jonas-fuchs
snps,Scripts for file processing and analysis in phylogenetics and phylogeography
User: justincbagley
snps,An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.
User: kaustubhad
snps,Manual
User: lauzingaretti
Home Page: https://lauzingaretti.github.io/pSBVB/
snps,Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.
Organization: medvedevgroup
Home Page: https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/bty641/5056043
snps,A tool for simulating random mutations in any genome
User: mkpython3
snps,Extract SNPs and accessory differences in closely related bacterial genomes from k-mers
User: moorembioinfo
snps,Disease Clustering from Literature Based on Minimal Training Data
Organization: ncbi-hackathons
snps,A QC pipeline for SVs calls based on coverage and SNP calls
Organization: ncbi-hackathons
snps,Find causal cell-types underlying complex trait genetics
Organization: neurogenomics
Home Page: https://neurogenomics.github.io/MAGMA_Celltyping
snps,Compressed storage for SNP data
Organization: openmendel
Home Page: https://openmendel.github.io/SnpArrays.jl/latest
snps,An Efficient Swiss Army Knife for Population Genomic Analyses in R
User: pievos101
snps,Collection of Python scripts for parsing/analyses of RAD-seq data
User: pimbongaerts
snps,R-based pipeline/script to implement a Genome-Wide Association Study (GWAS) analysis based on the RAINBOWR package
Organization: silkeallmannlab
snps,:bookmark: Get SNP proxies from the 1000 Genomes Project.
User: slowkow
snps,A suite of bioinformatics data processing and analysis pipelines, software, and training resources for common DNA and RNA sequence analysis methods.
Organization: sydney-informatics-hub
snps,Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
User: tariqdaouda
Home Page: http://pygeno.iric.ca
snps,Quality Control Summary Pipeline for Array-based Genome Studio Projects (idats, raw genotype quality)
User: tbrunetti
snps,:scissors: :zap: Rapid haploid variant calling and core genome alignment
User: tseemann
snps,vSNP -- validate SNPs
Organization: usda-vs
snps,map and call next generation genomic sequencing
Organization: wingolab-org
snps,A haplotype analysis toolkit for natural variation study.
User: xukaili
snps,An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions
User: ytlogos
Home Page: https://bnapus-zju.com/bnasnpdb
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